RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CXXC5Q7LFL8 322 aaKnown RBP18.87■□□□□ 0.61
CBWD3-207ENST00000611426 EGLN3Q9H6Z9 239 aa18.87■□□□□ 0.61
CBWD3-207ENST00000611426 GPR35Q9HC97 309 aa18.87■□□□□ 0.61
CBWD3-207ENST00000611426 FKBP14Q9NWM8 211 aa18.87■□□□□ 0.61
CBWD3-207ENST00000611426 SCN3BQ9NY72 215 aa18.87■□□□□ 0.61
CBWD3-207ENST00000611426 PCDHGB1Q9Y5G3 927 aa18.87■□□□□ 0.61
CBWD3-207ENST00000611426 FKBP7Q9Y680 259 aa18.87■□□□□ 0.61
CBWD3-207ENST00000611426 YLPM1P49750 1951 aaKnown RBP18.86■□□□□ 0.61
CBWD3-207ENST00000611426 EFCAB9A8MZ26 197 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 AKAP8O43823 692 aaKnown RBP18.86■□□□□ 0.61
CBWD3-207ENST00000611426 IFNA2P01563 188 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 FXYD6P3P58550 94 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 FHL1Q13642 323 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 MFSD13AQ14CX5 517 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 CHRFAM7AQ494W8 412 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 ANKDD1AQ495B1 522 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 ACSM5Q6NUN0 579 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 VHLLQ6RSH7 139 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 FAM169BQ8N8A8 192 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 SGTBQ96EQ0 304 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 VRK1Q99986 396 aaPredicted RBP18.86■□□□□ 0.61
CBWD3-207ENST00000611426 CRLF2Q9HC73 371 aa18.86■□□□□ 0.61
CBWD3-207ENST00000611426 LOC102725191A0A1B0GVB3 256 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 B9A039 149 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 IGKV3-15P01624 115 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 IGLV1-44P01699 117 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 HMGN1P05114 100 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 HTR1AP08908 422 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 OR4A8P0C604 315 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 CBR1P16152 277 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 JUNBP17275 347 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-207ENST00000611426 FMO3P31513 532 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 CDH15P55291 814 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 CEACAM16Q2WEN9 425 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 MEDAGQ5VYS4 303 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 PTCHD4Q6ZW05 846 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 SLC46A3Q7Z3Q1 461 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 UEVLDQ8IX04 471 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 BPIFB6Q8NFQ5 453 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 OR4F15Q8NGB8 312 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 FANK1Q8TC84 345 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 ZNF837Q96EG3 531 aaPredicted RBP18.85■□□□□ 0.61
CBWD3-207ENST00000611426 Q96MT0 163 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 SORCS2Q96PQ0 1159 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 OR2M2Q96R28 347 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 TSSK6Q9BXA6 273 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 TEX12Q9BXU0 123 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 FAM192AQ9GZU8 254 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 OR52D1Q9H346 318 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 TBC1D23Q9NUY8 699 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 NDUFA13Q9P0J0 144 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 PSORS1C1Q9UIG5 152 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 BAIAP2Q9UQB8 552 aa18.85■□□□□ 0.61
CBWD3-207ENST00000611426 MS4A18H0YCH9 400 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 ATP6V1B1P15313 513 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 USF1P22415 310 aaPredicted RBP18.84■□□□□ 0.61
CBWD3-207ENST00000611426 CALCRP30988 508 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 GRK5P34947 590 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 PDLIM4P50479 330 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 ADIPOQQ15848 244 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 MS4A18Q3C1V0 323 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 CYB5R2Q6BCY4 276 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 SMARCD3Q6STE5 483 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 MEX3DQ86XN8 651 aaKnown RBP18.84■□□□□ 0.61
CBWD3-207ENST00000611426 LNX2Q8N448 690 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 ADPRHL1Q8NDY3 354 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 OR2T33Q8NG76 320 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 OR6S1Q8NH40 331 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 KCNK17Q96T54 332 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 ASPNQ9BXN1 380 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 SEC61A2Q9H9S3 476 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 PAK1IP1Q9NWT1 392 aaPredicted RBP18.84■□□□□ 0.61
CBWD3-207ENST00000611426 CLN6Q9NWW5 311 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 CNOT2Q9NZN8 540 aaKnown RBP18.84■□□□□ 0.61
CBWD3-207ENST00000611426 CORINQ9Y5Q5 1042 aa18.84■□□□□ 0.61
CBWD3-207ENST00000611426 SMIM31A0A1B0GVY4 71 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 M0R3G1 203 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 KPNA4O00629 521 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-207ENST00000611426 BHLHE40O14503 412 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 TRAF3IP2O43734 574 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-207ENST00000611426 XPNPEP2O43895 674 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 OR7A10O76100 309 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 PIPP12273 146 aaPredicted RBP18.83■□□□□ 0.61
CBWD3-207ENST00000611426 SLC15A1P46059 708 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 CAPZA2P47755 286 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 SMN1Q16637 294 aaKnown RBP18.83■□□□□ 0.61
CBWD3-207ENST00000611426 ZBED5Q49AG3 693 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 CARD17Q5XLA6 110 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 TMEM123Q8N131 208 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 IQCF1Q8N6M8 205 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 C10orf53Q8N6V4 93 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 OR52L1Q8NGH7 329 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 OR4Q3Q8NH05 313 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 SPATA3Q8NHX4 192 aa18.83■□□□□ 0.61
CBWD3-207ENST00000611426 SVEP1Q4LDE5 3571 aa18.83■□□□□ 0.6
CBWD3-207ENST00000611426 VSTM5A8MXK1 200 aa18.82■□□□□ 0.6
CBWD3-207ENST00000611426 ZNF99A8MXY4 864 aaPredicted RBP18.82■□□□□ 0.6
CBWD3-207ENST00000611426 CELA3BP08861 270 aa18.82■□□□□ 0.6
CBWD3-207ENST00000611426 TSPAN19P0C672 248 aa18.82■□□□□ 0.6
CBWD3-207ENST00000611426 SAGP10523 405 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms