RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 RHOUQ7L0Q8 258 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 NDUFAF7Q7L592 441 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 NKAIN3Q8N8D7 197 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 OR6M1Q8NGM8 313 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 OR1J4Q8NGS1 313 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 ST7LQ8TDW4 575 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 RNF133Q8WVZ7 376 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 ATOH1Q92858 354 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-224ENST00000610907 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-224ENST00000610907 DNAJA3Q96EY1 480 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 ARL5BQ96KC2 179 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 C5orf34Q96MH7 638 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 SPSB2Q99619 263 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 CRB3Q9BUF7 120 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 ZNF436Q9C0F3 470 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-224ENST00000610907 SLCO5A1Q9H2Y9 848 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 WDR54Q9H977 334 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 NPDC1Q9NQX5 325 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-224ENST00000610907 PRMT8Q9NR22 394 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-224ENST00000610907 DLL4Q9NR61 685 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 OR52A1Q9UKL2 312 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 WIF1Q9Y5W5 379 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 B3GALT1Q9Y5Z6 326 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 U3KQA8 63 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 EXPH5Q8NEV8 1989 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 CABIN1Q9Y6J0 2220 aa9.35□□□□□ -0.91
PABPC1-224ENST00000610907 CIB4A0PJX0 185 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 H0YC42 278 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 SMLR1H3BR10 107 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 AKR7A2O43488 359 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 TIAF1O95411 115 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 DCNP07585 359 aaKnown RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 FGF5P12034 268 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 ADH6P28332 368 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 PRSS3P35030 304 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 EIF1P41567 113 aaKnown RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 GNG2P59768 71 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 RPS15P62841 145 aaKnown RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 GALK2Q01415 458 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 POU3F1Q03052 451 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 FOXF1Q12946 379 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 SNTA1Q13424 505 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 ZNF239Q16600 458 aaKnown RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 ODF4Q2M2E3 257 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 PLPPR5Q32ZL2 321 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 PMS2CLQ68D20 193 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 MRPL14Q6P1L8 145 aaKnown RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 ARSKQ6UWY0 536 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 NHLRC1Q6VVB1 395 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 C16orf47Q6ZP98 133 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 DCXRQ7Z4W1 244 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 BMPERQ8N8U9 685 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 OR10H5Q8NGA6 315 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 THAP3Q8WTV1 239 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 SLC25A43Q8WUT9 341 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 SLC25A28Q96A46 364 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 SLC25A44Q96H78 314 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 CCDC74BQ96LY2 380 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 OR10A4Q9H209 315 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 METTL7AQ9H8H3 244 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 SCPEP1Q9HB40 452 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 G6PC2Q9NQR9 355 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 NKIRAS2Q9NYR9 191 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 MRPL15Q9P015 296 aaKnown RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 ZNF107Q9UII5 783 aaPredicted RBP9.34□□□□□ -0.91
PABPC1-224ENST00000610907 PILRBQ9UKJ0 227 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 GTF2A1LQ9UNN4 478 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 CACNA1EQ15878 2313 aa9.34□□□□□ -0.91
PABPC1-224ENST00000610907 LOC102723996A0A087X1L8 192 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 LOC102725191A0A1B0GVB3 256 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 TMEM269A0A1B0GVZ9 245 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 LOC390937A0A1W2PQ73 354 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 C2orf72A6NCS6 295 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 MEN1O00255 615 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 TP53I11O14683 189 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 ARPC1BO15143 372 aaKnown RBP9.33□□□□□ -0.92
PABPC1-224ENST00000610907 CREBL2O60519 120 aaPredicted RBP9.33□□□□□ -0.92
PABPC1-224ENST00000610907 HPXP02790 462 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 TPOP07202 933 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 H2BFMP0C1H6 154 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 AKAIN1P0CW23 69 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 GABRA1P14867 456 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 IL11P20809 199 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 C4BPBP20851 252 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 DNASE1P24855 282 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 HTR2CP28335 458 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 PTGDSP41222 190 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 DNASE1L1P49184 302 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 VEGFCP49767 419 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 ACTBP60709 375 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 ACTG1P63261 375 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 MFGE8Q08431 387 aaPredicted RBP9.33□□□□□ -0.92
PABPC1-224ENST00000610907 TRA2AQ13595 282 aaKnown RBP eCLIP9.33□□□□□ -0.92
PABPC1-224ENST00000610907 RBMS2Q15434 407 aaKnown RBP9.33□□□□□ -0.92
PABPC1-224ENST00000610907 HLA-BQ31612 363 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 PCGF3Q3KNV8 242 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 LINC00303Q3SY05 128 aa9.33□□□□□ -0.92
PABPC1-224ENST00000610907 TMEM255AQ5JRV8 349 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms