RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 HEXAP06865 529 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 RAP2AP10114 183 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 ALDH3B1P43353 468 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 GDI2P50395 445 aaKnown RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 ERFP50548 548 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 HMGA2P52926 109 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 RIPPLY3P57055 190 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 DSCR9P59020 149 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 PCBD1P61457 104 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 DBPQ10586 325 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 TRAP1Q12931 704 aaKnown RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 ENDOGQ14249 297 aaKnown RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 MAD2L1BPQ15013 274 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 CLEC12AQ5QGZ9 265 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 OR2T5Q6IEZ7 315 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 ZNF774Q6NX45 483 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 ADCK1Q86TW2 530 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 SPATA24Q86W54 205 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 OR10H5Q8NGA6 315 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 OR4C15Q8NGM1 316 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 OR2T29Q8NH02 315 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 OR4K13Q8NH42 304 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 SLC7A6OSQ96CW6 309 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 WNT5BQ9H1J7 359 aa12.4□□□□□ -0.42
TUBE1-208ENST00000604743 SRA1Q9HD15 236 aaKnown RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 MYEF2Q9P2K5 600 aaKnown RBP12.4□□□□□ -0.42
TUBE1-208ENST00000604743 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 DNAJC8O75937 253 aaPredicted RBP12.39□□□□□ -0.43
TUBE1-208ENST00000604743 GPANK1O95872 356 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 CLPTM1O96005 669 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 RENP00797 406 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 CST1P01037 141 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 ERCC1P07992 297 aaPredicted RBP12.39□□□□□ -0.43
TUBE1-208ENST00000604743 HIST1H1CP16403 213 aaKnown RBP12.39□□□□□ -0.43
TUBE1-208ENST00000604743 RAD52P43351 418 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 PDLIM4P50479 330 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 UCP2P55851 309 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 SLC35F1Q5T1Q4 408 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 ADGRG5Q8IZF4 528 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 LINC00471Q8N535 108 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 AQP11Q8NBQ7 271 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 SDR9C7Q8NEX9 313 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 OR52L1Q8NGH7 329 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 OR1J1Q8NGS3 322 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 CANT1Q8WVQ1 401 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 POM121L2Q96KW2 1035 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 NMNAT3Q96T66 252 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 CHID1Q9BWS9 393 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 FN3KQ9H479 309 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 EIF3KQ9UBQ5 218 aaKnown RBP12.39□□□□□ -0.43
TUBE1-208ENST00000604743 REV1Q9UBZ9 1251 aa12.39□□□□□ -0.43
TUBE1-208ENST00000604743 FBXO9Q9UK97 447 aaPredicted RBP12.39□□□□□ -0.43
TUBE1-208ENST00000604743 DHRS12A0PJE2 317 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 AQP12BA6NM10 295 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 M0R233 179 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 DCTN6O00399 190 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 GNGT2O14610 69 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 SYNGR3O43761 229 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 SNAP29O95721 258 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 CSF3P09919 207 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 APEHP13798 732 aaKnown RBP12.38□□□□□ -0.43
TUBE1-208ENST00000604743 CRABP1P29762 137 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 SELENOVP59797 346 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 FLOT2Q14254 428 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 MICAQ29983 383 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 SPATA46Q5T0L3 261 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 DNM1P34Q6PK57 102 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 GLB1L2Q8IW92 636 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 AQP12AQ8IXF9 295 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 OR52E2Q8NGJ4 325 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 SYNPRQ8TBG9 265 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 C10orf105Q8TEF2 133 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 C11orf40Q8WZ69 217 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 POP5Q969H6 163 aaKnown RBP12.38□□□□□ -0.43
TUBE1-208ENST00000604743 PLA2G12AQ9BZM1 189 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 BCL2L14Q9BZR8 327 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 RPRD1BQ9NQG5 326 aaKnown RBP12.38□□□□□ -0.43
TUBE1-208ENST00000604743 TBC1D23Q9NUY8 699 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 TAAR3PQ9P1P4 343 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 B9D1Q9UPM9 204 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 POLR1DQ9Y2S0 133 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 CDH10Q9Y6N8 788 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 NF1P21359 2839 aa12.38□□□□□ -0.43
TUBE1-208ENST00000604743 ARPC3O15145 178 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 DOK2O60496 412 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 IGFBP1P08833 259 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-208ENST00000604743 NAT2P11245 290 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 DAOP14920 347 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 SLC25A16P16260 332 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 PCSK6P29122 969 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 WNT5AP41221 380 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 EVX1P49640 407 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 KLF3P57682 345 aaPredicted RBP12.37□□□□□ -0.43
TUBE1-208ENST00000604743 GLO1Q04760 184 aa12.37□□□□□ -0.43
TUBE1-208ENST00000604743 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.37□□□□□ -0.43
TUBE1-208ENST00000604743 SCRN3Q0VDG4 424 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms