RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 TSSK2Q96PF2 358 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 TSSK6Q9BXA6 273 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 WNT5BQ9H1J7 359 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 PLK3Q9H4B4 646 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 PDP1Q9P0J1 537 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-215ENST00000601150 FBXO9Q9UK97 447 aaPredicted RBP14.54□□□□□ -0.08
TRIM28-215ENST00000601150 BAIAP2Q9UQB8 552 aa14.54□□□□□ -0.08
TRIM28-215ENST00000601150 IGLV1-36A0A0B4J1U3 117 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 GPRIN2O60269 458 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 DEAF1O75398 565 aaPredicted RBP14.53□□□□□ -0.08
TRIM28-215ENST00000601150 CIB2O75838 187 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 MPZL1O95297 269 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 SOX14O95416 240 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 IGFBP1P08833 259 aaPredicted RBP14.53□□□□□ -0.08
TRIM28-215ENST00000601150 CENPAP49450 140 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 LSM6P62312 80 aaKnown RBP14.53□□□□□ -0.08
TRIM28-215ENST00000601150 SCRN3Q0VDG4 424 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 KCNMB1Q16558 191 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 ASRGL1Q7L266 308 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 OR6V1Q8N148 313 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 LNX2Q8N448 690 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 NPEPL1Q8NDH3 523 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 NIPSNAP1Q9BPW8 284 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 BDH2Q9BUT1 245 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 SRA1Q9HD15 236 aaKnown RBP14.53□□□□□ -0.08
TRIM28-215ENST00000601150 RPRD1BQ9NQG5 326 aaKnown RBP14.53□□□□□ -0.08
TRIM28-215ENST00000601150 B9D1Q9UPM9 204 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 FKBP7Q9Y680 259 aa14.53□□□□□ -0.08
TRIM28-215ENST00000601150 OR6C68A6NDL8 312 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 DCTN6O00399 190 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 TIPRLO75663 272 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 TP53P04637 393 aaPredicted RBP14.52□□□□□ -0.09
TRIM28-215ENST00000601150 FAM157BP0CG42 384 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 FOSL1P15407 271 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 PCSK6P29122 969 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 GDI2P50395 445 aaKnown RBP14.52□□□□□ -0.09
TRIM28-215ENST00000601150 ARHGDIAP52565 204 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 NUDT6P53370 316 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 AQP6Q13520 282 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 CCNIQ14094 377 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 CLEC12BQ2HXU8 276 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF774Q6NX45 483 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 ZBTB46Q86UZ6 589 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 SVOPLQ8N434 492 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 OR2T33Q8NG76 320 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 OR4Q3Q8NH05 313 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 TEX47Q8TBZ9 253 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 C11orf40Q8WZ69 217 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 MRPL24Q96A35 216 aaKnown RBP14.52□□□□□ -0.09
TRIM28-215ENST00000601150 POM121L2Q96KW2 1035 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 DOK1Q99704 481 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 RACGAP1Q9H0H5 632 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 FN3KQ9H479 309 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF556Q9HAH1 456 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 DLL4Q9NR61 685 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 ARMC1Q9NVT9 282 aa14.52□□□□□ -0.09
TRIM28-215ENST00000601150 TEP1Q99973 2627 aaKnown RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 LOC100509620A0A075B734 347 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 TMEM129A0AVI4 362 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 C5orf49A4QMS7 147 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 EBAG9O00559 213 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 SSX4O60224 188 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 GAAP10253 952 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 CCNOP22674 350 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 RAD52P43351 418 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 EVX1P49640 407 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 PPOXP50336 477 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 UCP2P55851 309 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 GLO1Q04760 184 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 MSMPQ1L6U9 139 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 SHQ1Q6PI26 577 aaKnown RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 SLC26A10Q8NG04 563 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 UTP4Q969X6 686 aaKnown RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 NRBF2Q96F24 287 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 DUS3LQ96G46 650 aaKnown RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 VRK1Q99986 396 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 MRPL37Q9BZE1 423 aaKnown RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 OR51B6Q9H340 312 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 NTN4Q9HB63 628 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 ASH2LQ9UBL3 628 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 EIF3KQ9UBQ5 218 aaKnown RBP14.51□□□□□ -0.09
TRIM28-215ENST00000601150 REV1Q9UBZ9 1251 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 KLHL21Q9UJP4 597 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 POLR1DQ9Y2S0 133 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 RTTNQ86VV8 2226 aa14.51□□□□□ -0.09
TRIM28-215ENST00000601150 CHD3Q12873 2000 aaKnown RBP14.5□□□□□ -0.09
TRIM28-215ENST00000601150 TRIM64A6NGJ6 449 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 TRIM64BA6NI03 449 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 H3BN98 237 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 SGCEO43556 437 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 DOK2O60496 412 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 GPANK1O95872 356 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 COX5BP10606 129 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 ANXA8P13928 327 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 PRKACGP22612 351 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 EFNA4P52798 201 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 SLC36A3Q495N2 470 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 ZNF362Q5T0B9 420 aaPredicted RBP14.5□□□□□ -0.09
TRIM28-215ENST00000601150 OTPQ5XKR4 325 aa14.5□□□□□ -0.09
TRIM28-215ENST00000601150 RGS7BPQ6MZT1 257 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms