RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DPPA2Q7Z7J5 298 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 SYT9Q86SS6 491 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 OR51L1Q8NGJ5 315 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 STMN2Q93045 179 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 C9orf16Q9BUW7 83 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 MOV10Q9HCE1 1003 aaKnown RBP11.91□□□□□ -0.5
VRK3-219ENST00000600137 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
VRK3-219ENST00000600137 MOKQ9UQ07 419 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 LHFPL6Q9Y693 200 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 MAST4O15021 2626 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 AKAP9Q99996 3911 aa11.91□□□□□ -0.5
VRK3-219ENST00000600137 LOC100509620A0A075B734 347 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 RIIAD1A6NNX1 92 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 ATP6V1G2-DDX39BF2Z307 99 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 PRKYO43930 277 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 IFNGP01579 166 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 DANCRP0C864 163 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 SLC2A5P22732 501 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 GGT2P36268 569 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 TEKQ02763 1124 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 PCK2Q16822 640 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 RSPO1Q2MKA7 263 aaPredicted RBP11.9□□□□□ -0.5
VRK3-219ENST00000600137 ZNF672Q499Z4 452 aaPredicted RBP11.9□□□□□ -0.5
VRK3-219ENST00000600137 CCDC92Q53HC0 331 aaPredicted RBP11.9□□□□□ -0.5
VRK3-219ENST00000600137 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 DNM1P34Q6PK57 102 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 ZBTB49Q6ZSB9 765 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 CPOQ8IVL8 374 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 PAQR4Q8N4S7 273 aaPredicted RBP11.9□□□□□ -0.5
VRK3-219ENST00000600137 ZNF511Q8NB15 262 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 BBS1Q8NFJ9 593 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 AKR7LQ8NHP1 331 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 NANOS1Q8WY41 292 aaKnown RBP11.9□□□□□ -0.5
VRK3-219ENST00000600137 AKAP1Q92667 903 aaKnown RBP eCLIP11.9□□□□□ -0.5
VRK3-219ENST00000600137 RADILQ96JH8 1075 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 POM121L2Q96KW2 1035 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 MBOAT4Q96T53 435 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 WACQ9BTA9 647 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 GRIP2Q9C0E4 1043 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 OR2H1Q9GZK4 316 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 MARCH7Q9H992 704 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 TVP23BQ9NYZ1 205 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 TIMM10BQ9Y5J6 103 aa11.9□□□□□ -0.5
VRK3-219ENST00000600137 TVP23AA6NH52 213 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 M0R129 80 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 HS3ST1O14792 307 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
VRK3-219ENST00000600137 ZNF3P17036 446 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 APEX1P27695 318 aaKnown RBP11.89□□□□□ -0.51
VRK3-219ENST00000600137 NKX6-1P78426 367 aaPredicted RBP11.89□□□□□ -0.51
VRK3-219ENST00000600137 GLO1Q04760 184 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 MSMPQ1L6U9 139 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 AADACL4Q5VUY2 407 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 LPCAT4Q643R3 524 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 ZNF774Q6NX45 483 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 PLBD1Q6P4A8 553 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 PIAS4Q8N2W9 510 aaPredicted RBP11.89□□□□□ -0.51
VRK3-219ENST00000600137 ZNF611Q8N823 705 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 IL17RDQ8NFM7 739 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 UBE2FQ969M7 185 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 HRASLS5Q96KN8 279 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 RNF121Q9H920 327 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 WDR76Q9H967 626 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 CYB5R1Q9UHQ9 305 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
VRK3-219ENST00000600137 C12orf71A8MTZ7 269 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 RER1O15258 196 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 SNAP29O95721 258 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 RAB36O95755 333 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 CD8AP01732 235 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 CCL2P13500 99 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 CD53P19397 219 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 GUCA1AP43080 201 aaPredicted RBP11.88□□□□□ -0.51
VRK3-219ENST00000600137 AQP6Q13520 282 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 SNAPC1Q16533 368 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 ZIK1Q3SY52 487 aaPredicted RBP11.88□□□□□ -0.51
VRK3-219ENST00000600137 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 FBXW10Q5XX13 1052 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 SLC18B1Q6NT16 456 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 SLC22A25Q6T423 547 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
VRK3-219ENST00000600137 TCEANCQ8N8B7 351 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 TOR3AQ9H497 397 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 RIBC2Q9H4K1 309 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 DCLRE1BQ9H816 532 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 PNRC2Q9NPJ4 139 aaKnown RBP11.88□□□□□ -0.51
VRK3-219ENST00000600137 CISD1Q9NZ45 108 aaKnown RBP11.88□□□□□ -0.51
VRK3-219ENST00000600137 ASH2LQ9UBL3 628 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 ENOPH1Q9UHY7 261 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 FBXL3Q9UKT7 428 aa11.88□□□□□ -0.51
VRK3-219ENST00000600137 OTOGQ6ZRI0 2925 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 MYO9AB2RTY4 2548 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 ARFGEF3Q5TH69 2177 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 CCDC182A6NF36 153 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 OR6C6A6NF89 314 aa11.87□□□□□ -0.51
VRK3-219ENST00000600137 PRR23D1E9PI22 279 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms