RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 OR1J4Q8NGS1 313 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 ZBTB8AQ96BR9 441 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 CENPMQ9NSP4 180 aa12.89□□□□□ -0.35
VRK3-217ENST00000599538 FARSAQ9Y285 508 aaKnown RBP12.89□□□□□ -0.35
VRK3-217ENST00000599538 LMX1BO60663 402 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 TMIGD3P0DMS9 266 aaPredicted RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 RAB25P57735 213 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 RSBN1Q5VWQ0 802 aaPredicted RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 ZNF544Q6NX49 715 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 MZT2BQ6NZ67 158 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 LRFN4Q6PJG9 635 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 TMPPEQ6ZT21 453 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 GLB1L2Q8IW92 636 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 DND1Q8IYX4 353 aaKnown RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 ARMC10Q8N2F6 343 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 ADAMTS14Q8WXS8 1223 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 TAAR9Q96RI9 348 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 EMC7Q9NPA0 242 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 PCDHGA5Q9Y5G8 931 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 A0A1W2PPL8 197 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 CSRP1P21291 193 aaKnown RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 MMP15P51511 669 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 CLRN1P58418 232 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 FAM205BPQ63HN1 556 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 TIGD3Q6B0B8 471 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 ADPRHL1Q8NDY3 354 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 SLC25A43Q8WUT9 341 aaPredicted RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 ASB5Q8WWX0 329 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 SLC25A44Q96H78 314 aaPredicted RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 OXGR1Q96P68 337 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 RBP7Q96R05 134 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 UCN2Q96RP3 112 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 STRADBQ9C0K7 418 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 SLITRK2Q9H156 845 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 KCNK15Q9H427 330 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 NUFIP1Q9UHK0 495 aaKnown RBP12.88□□□□□ -0.35
VRK3-217ENST00000599538 CAMK2AQ9UQM7 478 aa12.88□□□□□ -0.35
VRK3-217ENST00000599538 ANXA2P2A6NMY6 339 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 ZNF432O94892 652 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 RAF1P04049 648 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 ANXA2P07355 339 aaKnown RBP12.87□□□□□ -0.35
VRK3-217ENST00000599538 ZNF43P17038 809 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 SLC6A1P30531 599 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 NR4A2P43354 598 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 DSCR4P56555 118 aaPredicted RBP12.87□□□□□ -0.35
VRK3-217ENST00000599538 GPR85P60893 370 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 CBX3Q13185 183 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 CFAP77Q6ZQR2 320 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 ZNF227Q86WZ6 799 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 SYNPRQ8TBG9 265 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 UBASH3BQ8TF42 649 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 LOXL4Q96JB6 756 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 BEX2Q9BXY8 128 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 SEC61A2Q9H9S3 476 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 P4HTMQ9NXG6 502 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 KLHL9Q9P2J3 617 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 CYB5R1Q9UHQ9 305 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 MRPS18BQ9Y676 258 aaKnown RBP12.87□□□□□ -0.35
VRK3-217ENST00000599538 R4GMQ9 66 aa12.87□□□□□ -0.35
VRK3-217ENST00000599538 AQP8O94778 261 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 ANOS1P23352 680 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 LAP3P28838 519 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 CLDN20P56880 219 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 H3F3AP84243 136 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 SSPNQ14714 243 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 DHRS13Q6UX07 377 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 SIAH3Q8IW03 269 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 ZBTB8BQ8NAP8 495 aaPredicted RBP12.86□□□□□ -0.35
VRK3-217ENST00000599538 RNF133Q8WVZ7 376 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 NPAP1Q9NZP6 1156 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 DKKL1Q9UK85 242 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 LHFPL6Q9Y693 200 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 NCOA6Q14686 2063 aaPredicted RBP12.86□□□□□ -0.35
VRK3-217ENST00000599538 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 IGHEP01854 428 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 IGHG1P01857 330 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 HRGP04196 525 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 ITGA5P08648 1049 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 RFPL3SP0C7P2 107 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 PTH2RP49190 550 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 TOMM20Q15388 145 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 KCNJ8Q15842 424 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 ZNF239Q16600 458 aaKnown RBP12.86□□□□□ -0.35
VRK3-217ENST00000599538 TBRG1Q3YBR2 411 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 THEM4Q5T1C6 240 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 ATAD3CQ5T2N8 411 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 BIVMQ86UB2 503 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 ESX1Q8N693 406 aa12.86□□□□□ -0.35
VRK3-217ENST00000599538 PLPP7Q8NBV4 271 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms