RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LINGO2Q7L985 606 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 MEX3DQ86XN8 651 aaKnown RBP10.6□□□□□ -0.71
ZNF548-209ENST00000598895 WDFY1Q8IWB7 410 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 OR5J2Q8NH18 312 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 OR6S1Q8NH40 331 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 TMEM239Q8WW34 195 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 HSD17B8Q92506 261 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 ZNF486Q96H40 463 aaPredicted RBP10.6□□□□□ -0.71
ZNF548-209ENST00000598895 PRRC1Q96M27 445 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 OPALINQ96PE5 141 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 PRRG3Q9BZD7 231 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 OR10A4Q9H209 315 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 ISYNA1Q9NPH2 558 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 NANSQ9NR45 359 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 C20orf141Q9NUB4 165 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 MRPL39Q9NYK5 338 aaKnown RBP10.6□□□□□ -0.71
ZNF548-209ENST00000598895 ST6GALNAC2Q9UJ37 374 aa10.6□□□□□ -0.71
ZNF548-209ENST00000598895 HRNRQ86YZ3 2850 aaPredicted RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 OR5H1A6NKK0 313 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ZNF670-ZNF695F2Z2N8 137 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 PLPP3O14495 311 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 TRAF3IP2O43734 574 aaPredicted RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 FZD7O75084 574 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 SLC43A1O75387 559 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 GOSR1O95249 250 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 IL1AP01583 271 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 HIST1H2ABP04908 130 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 FUT1P19526 365 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 GSTM3P21266 225 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 POU1F1P28069 291 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ZNF83P51522 516 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 PUDPQ08623 228 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ST3GAL3Q11203 375 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 MELKQ14680 651 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 PHYHD1Q5SRE7 291 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 PAMR1Q6UXH9 720 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 CD300LDQ6UXZ3 194 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ZNF704Q6ZNC4 412 aaPredicted RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 GDPD3Q7L5L3 318 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 HIST3H2AQ7L7L0 130 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 NANOGNBQ7Z5D8 188 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 OR8H2Q8N162 312 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 CLDN22Q8N7P3 220 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 NANOGP1Q8N7R0 232 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 POMGNT2Q8NAT1 580 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ADPRHL1Q8NDY3 354 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 IL17RDQ8NFM7 739 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 AP3S1Q92572 193 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 HIST1H2ACQ93077 130 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 MUCL1Q96DR8 90 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 SGTBQ96EQ0 304 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 OR2M2Q96R28 347 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 OR5M11Q96RB7 305 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 SNX18Q96RF0 628 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ZNF426Q9BUY5 554 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 FNDC11Q9BVV2 318 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 POLR2J2Q9GZM3 115 aaKnown RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 POLR2J3Q9H1A7 115 aaKnown RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 FKRPQ9H9S5 495 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 NEK6Q9HC98 313 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 EXOSC4Q9NPD3 245 aaKnown RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 NDUFB11Q9NX14 153 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 LSM2Q9Y333 95 aaKnown RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 CMAHPQ9Y471 501 aa10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ANKHD1Q8IWZ3 2542 aaKnown RBP10.59□□□□□ -0.71
ZNF548-209ENST00000598895 ZNF587BE7ETH6 402 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 BLOC1S5-TXNDC5H3BN57 136 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 H3BN98 237 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 FFAR1O14842 300 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 RNF13O43567 381 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 IDH3BO43837 385 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 OR10H3O60404 316 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 ENTPD6O75354 484 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 GPX5O75715 221 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 OR7A10O76100 309 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 RAB36O95755 333 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 RAF1P04049 648 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 IFI30P13284 250 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 IFNGR1P15260 489 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 DNASE1P24855 282 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 MPGP29372 298 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 IFNA8P32881 189 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 TNFSF8P32971 234 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 IFNGR2P38484 337 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 RBM34P42696 430 aaKnown RBP10.58□□□□□ -0.72
ZNF548-209ENST00000598895 ART1P52961 327 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 BIDP55957 195 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 BSPH1Q075Z2 132 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 SCN1BQ07699 218 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 CAMK2DQ13557 499 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 SSX1Q16384 188 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 TIMM23BQ5SRD1 257 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 SEZ6L2Q6UXD5 910 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 NEUROG1Q92886 237 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 SLC19A3Q9BZV2 496 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 NGBQ9NPG2 151 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 TAS2R5Q9NYW4 299 aa10.58□□□□□ -0.72
ZNF548-209ENST00000598895 REV1Q9UBZ9 1251 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms