RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 NABP1Q96AH0 204 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 VKORC1Q9BQB6 163 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 WACQ9BTA9 647 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 C1orf198Q9H425 327 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 BATF3Q9NR55 127 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 PLSCR4Q9NRQ2 329 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 CYB5R1Q9UHQ9 305 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 IKZF2Q9UKS7 526 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 COPS3Q9UNS2 423 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 SVILO95425 2214 aa13.6□□□□□ -0.23
UPF1-206ENST00000598471 TNFSF13O75888 250 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 TOXO94900 526 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 IL18BPO95998 194 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 LCKP06239 509 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 CST2P09228 141 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 TACSTD2P09758 323 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 CD8BP10966 210 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 B4GALT1P15291 398 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 OPRM1P35372 400 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 RPS27P42677 84 aaKnown RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 ARF1P84077 181 aaKnown RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 PMPCAQ10713 525 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 FOXF2Q12947 444 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 MRPL28Q13084 256 aaKnown RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 TIGD6Q17RP2 521 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 CDONQ4KMG0 1287 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 SYT6Q5T7P8 510 aaPredicted RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 OR2G6Q5TZ20 316 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 VWA1Q6PCB0 445 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 Q6ZT83 130 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 DCXRQ7Z4W1 244 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 KCTD20Q7Z5Y7 419 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 LINC00346Q8IVM7 164 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 SLC22A24Q8N4F4 322 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 RPRMLQ8N4K4 120 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 OR52N5Q8NH56 324 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 STARD4Q96DR4 205 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 ZNF837Q96EG3 531 aaPredicted RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 ZNF649Q9BS31 505 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 ABHD6Q9BV23 337 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 ZNF416Q9BWM5 594 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 PIGMQ9H3S5 423 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 ISYNA1Q9NPH2 558 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 TRIM36Q9NQ86 728 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 ASH2LQ9UBL3 628 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 LSM2Q9Y333 95 aaKnown RBP13.59□□□□□ -0.23
UPF1-206ENST00000598471 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
UPF1-206ENST00000598471 GTF3C1Q12789 2109 aa13.58□□□□□ -0.23
UPF1-206ENST00000598471 IGSF10Q6WRI0 2623 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 METTL15A6NJ78 407 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 J3QLW9 94 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 SULT1C4O75897 302 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 SEC14L2O76054 403 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 INMTO95050 263 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 SCG5P05408 212 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 HSMCR30P0CW71 290 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 ZNF19P17023 458 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 CA7P43166 264 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 GBX2P52951 348 aaPredicted RBP13.58□□□□□ -0.24
UPF1-206ENST00000598471 TAS2R43P59537 309 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 SCRN3Q0VDG4 424 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 MLLT11Q13015 90 aaPredicted RBP13.58□□□□□ -0.24
UPF1-206ENST00000598471 OTPQ5XKR4 325 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 BEND4Q6ZU67 534 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 ZNF627Q7L945 461 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 SSX6Q7RTT6 188 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 SLC16A14Q7RTX9 510 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 BTLAQ7Z6A9 289 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 KRT77Q7Z794 578 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 DPPA2Q7Z7J5 298 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 LRRC18Q8N456 261 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 RFLNBQ8N5W9 214 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 GJC3Q8NFK1 279 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 C4orf36Q96KX1 117 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 COG8Q96MW5 612 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 OR5M11Q96RB7 305 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 OR8B4Q96RC9 309 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 MGLLQ99685 303 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 MROQ9BYG7 248 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 TTTY10Q9BZA0 68 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 GDF2Q9UK05 429 aaPredicted RBP13.58□□□□□ -0.24
UPF1-206ENST00000598471 GNG8Q9UK08 70 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 KLHDC2Q9Y2U9 406 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 LHFPL6Q9Y693 200 aa13.58□□□□□ -0.24
UPF1-206ENST00000598471 BOD1L1Q8NFC6 3051 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 FAM208BQ5VWN6 2430 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 ZNF254O75437 659 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 BDH1Q02338 343 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 ROM1Q03395 351 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 ENDOGQ14249 297 aaKnown RBP13.57□□□□□ -0.24
UPF1-206ENST00000598471 RAB39AQ14964 217 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 SLC36A2Q495M3 483 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 TP53I3Q53FA7 332 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 ARMCX4Q5H9R4 360 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 C9orf135Q5VTT2 229 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 ANKRD16Q6P6B7 361 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 DEGS2Q6QHC5 323 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 KLHL24Q6TFL4 600 aa13.57□□□□□ -0.24
UPF1-206ENST00000598471 SYT9Q86SS6 491 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms