RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 LCN6P62502 163 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 PRKCDQ05655 676 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 SLC36A2Q495M3 483 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF730Q6ZMV8 503 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 ZBTB49Q6ZSB9 765 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 FAM86B1Q8N7N1 296 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 LRRC75AQ8NAA5 344 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 CPEB3Q8NE35 698 aaKnown RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 NEU4Q8WWR8 484 aaPredicted RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 MSI2Q96DH6 328 aaKnown RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 CHODLQ9H9P2 273 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 CDH20Q9HBT6 801 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 MYOZ1Q9NP98 299 aaPredicted RBP11.81□□□□□ -0.52
SCAF1-203ENST00000598359 FBXL3Q9UKT7 428 aa11.81□□□□□ -0.52
SCAF1-203ENST00000598359 LOC100289279A0A1B0GTE1 492 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 A0A1W2PPW3 197 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 CENPBD1B2RD01 187 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 DLGAP1O14490 977 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SOCS2O14508 198 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 DIRAS1O95057 198 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 HPXP02790 462 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SEMG1P04279 462 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ERCC1P07992 297 aaPredicted RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 NAT2P11245 290 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF133P52736 654 aaPredicted RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 RPL27P61353 136 aaKnown RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 RPS23P62266 143 aaKnown RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ERVK-25P63136 954 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 MRPS34P82930 218 aaKnown RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 HSF2Q03933 536 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 CHRFAM7AQ494W8 412 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 PABPC1L2AQ5JQF8 200 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SLC25A47Q6Q0C1 308 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 MBOAT2Q6ZWT7 520 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 HDDC2Q7Z4H3 204 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 OAFQ86UD1 273 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 GALNT4Q8N4A0 578 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 AKR7LQ8NHP1 331 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF519Q8TB69 540 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 UBASH3BQ8TF42 649 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ACOT11Q8WXI4 607 aaPredicted RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 GTF3AQ92664 365 aaKnown RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SNX18Q96RF0 628 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SIAEQ9HAT2 523 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 DNAJB9Q9UBS3 223 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SCOCQ9UIL1 159 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 SAMD4AQ9UPU9 718 aaKnown RBP11.8□□□□□ -0.52
SCAF1-203ENST00000598359 ADAM18Q9Y3Q7 739 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 V9GYQ6 96 aa11.8□□□□□ -0.52
SCAF1-203ENST00000598359 IQCMA0A1B0GVH7 501 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 NPIPB13A6NJU9 1138 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 SAC3D1A6NKF1 404 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 RNF212BA8MTL3 300 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 NPIPB4C9JG80 1138 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 NCR1O76036 304 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 IGHMP01871 453 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 SCG5P05408 212 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 LCKP06239 509 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF23P17027 643 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF32P17041 273 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 CCNOP22674 350 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 IGFBP5P24593 272 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 COL8A2P25067 703 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 GIFP27352 417 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 LAP3P28838 519 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 EVX1P49640 407 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 GZMKP49863 264 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 CHN2P52757 468 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 PLP2Q04941 152 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 TBC1D28Q2M2D7 210 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 ELFN2Q5R3F8 820 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 RGS7BPQ6MZT1 257 aaPredicted RBP11.79□□□□□ -0.52
SCAF1-203ENST00000598359 PODNL1Q6PEZ8 512 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 ZNF786Q8N393 782 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 CBR4Q8N4T8 237 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 SLC7A13Q8TCU3 470 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 PYURFQ96I23 114 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 FAM46AQ96IP4 442 aaKnown RBP11.79□□□□□ -0.52
SCAF1-203ENST00000598359 NMNAT1Q9HAN9 279 aaPredicted RBP11.79□□□□□ -0.52
SCAF1-203ENST00000598359 CCNB1IP1Q9NPC3 277 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 TAAR3PQ9P1P4 343 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 FBXO9Q9UK97 447 aaPredicted RBP11.79□□□□□ -0.52
SCAF1-203ENST00000598359 OAZ3Q9UMX2 235 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 ENPP4Q9Y6X5 453 aa11.79□□□□□ -0.52
SCAF1-203ENST00000598359 LOC100509620A0A075B734 347 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 A0A1W2PPL8 197 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 LMX1BO60663 402 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 LILRA1O75019 489 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 APLNRP35414 380 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 RPL4P36578 427 aaKnown RBP11.78□□□□□ -0.52
SCAF1-203ENST00000598359 MAGEB1P43366 347 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 SLC9A3P48764 834 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 UCP2P55851 309 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 GLO1Q04760 184 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 RIN1Q13671 783 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 NKPD1Q17RQ9 610 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 NRN1LQ496H8 165 aa11.78□□□□□ -0.52
SCAF1-203ENST00000598359 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms