RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 C12orf71A8MTZ7 269 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 IDH3BO43837 385 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 SNAP29O95721 258 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 EFNA4P52798 201 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 TBC1D28Q2M2D7 210 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 ZNF774Q6NX45 483 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 GLB1L2Q8IW92 636 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 OR6V1Q8N148 313 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 OR10G2Q8NGC3 310 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 OR1J2Q8NGS2 313 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 VRK1Q99986 396 aaPredicted RBP19.62■□□□□ 0.73
IRF3-220ENST00000598108 DGCR6LQ9BY27 220 aa19.62■□□□□ 0.73
IRF3-220ENST00000598108 SRA1Q9HD15 236 aaKnown RBP19.62■□□□□ 0.73
IRF3-220ENST00000598108 IGLV1-36A0A0B4J1U3 117 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 OR6C68A6NDL8 312 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 BHLHE40O14503 412 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 ATP5HO75947 161 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 F12P00748 615 aaPredicted RBP19.61■□□□□ 0.73
IRF3-220ENST00000598108 TP53P04637 393 aaPredicted RBP19.61■□□□□ 0.73
IRF3-220ENST00000598108 CCNOP22674 350 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 NOS3P29474 1203 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 APLNRP35414 380 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 UCP2P55851 309 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 PCBD1P61457 104 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 ERVS71-1P61550 626 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 ZNF362Q5T0B9 420 aaPredicted RBP19.61■□□□□ 0.73
IRF3-220ENST00000598108 SYT9Q86SS6 491 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 JAZF1Q86VZ6 243 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 ZNF525Q8N782 197 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 PAPD5Q8NDF8 572 aaKnown RBP19.61■□□□□ 0.73
IRF3-220ENST00000598108 NPEPL1Q8NDH3 523 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 OR10H5Q8NGA6 315 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 OR52E2Q8NGJ4 325 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 C11orf40Q8WZ69 217 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 DDOQ99489 341 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 FEVQ99581 238 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 NIPSNAP1Q9BPW8 284 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 SYT3Q9BQG1 590 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 LRMDAQ9H2I8 198 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 MYEF2Q9P2K5 600 aaKnown RBP19.61■□□□□ 0.73
IRF3-220ENST00000598108 B9D1Q9UPM9 204 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 ARFGEF3Q5TH69 2177 aa19.61■□□□□ 0.73
IRF3-220ENST00000598108 C5orf49A4QMS7 147 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 RNF223E7ERA6 249 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 FKBP6O75344 327 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 SOX14O95416 240 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 PCSK6P29122 969 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 CRABP1P29762 137 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 WNT5AP41221 380 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 RASSF2P50749 326 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 MAPK1IP1LQ8NDC0 245 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 SDR9C7Q8NEX9 313 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 GIPC3Q8TF64 312 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 SNX18Q96RF0 628 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 FN3KQ9H479 309 aa19.6■□□□□ 0.73
IRF3-220ENST00000598108 RPRD1BQ9NQG5 326 aaKnown RBP19.6■□□□□ 0.73
IRF3-220ENST00000598108 IGHV4-30-2A0A087WSY4 118 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 FAM171A2A8MVW0 826 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 GNGT2O14610 69 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 RENP00797 406 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 GAAP10253 952 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 CENPAP49450 140 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 EVX1P49640 407 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 PPOXP50336 477 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 GDI2P50395 445 aaKnown RBP19.59■□□□□ 0.73
IRF3-220ENST00000598108 RPS23P62266 143 aaKnown RBP19.59■□□□□ 0.73
IRF3-220ENST00000598108 CBX1P83916 185 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.59■□□□□ 0.73
IRF3-220ENST00000598108 KCNMB1Q16558 191 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 MEP1BQ16820 701 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 RPL13AP3Q6NVV1 102 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 BIVMQ86UB2 503 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 HS3ST5Q8IZT8 346 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 OR52L1Q8NGH7 329 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 OR4Q3Q8NH05 313 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 TSSK6Q9BXA6 273 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 REG4Q9BYZ8 158 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 DUSP13Q9UII6 198 aa19.59■□□□□ 0.73
IRF3-220ENST00000598108 CLPTM1O96005 669 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 ADRA2AP08913 450 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 HOXB6P17509 224 aaKnown RBP19.58■□□□□ 0.72
IRF3-220ENST00000598108 GSTM3P21266 225 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 RAD52P43351 418 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 LSM6P62312 80 aaKnown RBP19.58■□□□□ 0.72
IRF3-220ENST00000598108 GK3PQ14409 553 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 RGS7BPQ6MZT1 257 aaPredicted RBP19.58■□□□□ 0.72
IRF3-220ENST00000598108 CD300LDQ6UXZ3 194 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.58■□□□□ 0.72
IRF3-220ENST00000598108 ZBTB46Q86UZ6 589 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 ALDH16A1Q8IZ83 802 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 ZNF101Q8IZC7 436 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 CYB561A3Q8NBI2 242 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 WACQ9BTA9 647 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 TBC1D23Q9NUY8 699 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 ARMC1Q9NVT9 282 aa19.58■□□□□ 0.72
IRF3-220ENST00000598108 PDP1Q9P0J1 537 aaPredicted RBP19.58■□□□□ 0.72
IRF3-220ENST00000598108 CSPG4Q6UVK1 2322 aa19.57■□□□□ 0.72
IRF3-220ENST00000598108 LY6G6DO95868 133 aa19.57■□□□□ 0.72
IRF3-220ENST00000598108 TFP02787 698 aa19.57■□□□□ 0.72
IRF3-220ENST00000598108 LCKP06239 509 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms