RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 NPEPL1Q8NDH3 523 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 OR8B3Q8NGG8 313 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 AKR7LQ8NHP1 331 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 TBC1D15Q8TC07 691 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 ITLN1Q8WWA0 313 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 NEIL1Q96FI4 390 aaPredicted RBP8.46□□□□□ -1.06
TRIM28-210ENST00000597618 MAGEB18Q96M61 343 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 OR8B2Q96RD0 313 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 NUDT16L1Q9BRJ7 211 aaKnown RBP8.46□□□□□ -1.06
TRIM28-210ENST00000597618 MRPL13Q9BYD1 178 aaKnown RBP8.46□□□□□ -1.06
TRIM28-210ENST00000597618 C20orf27Q9GZN8 174 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 EVA1AQ9H8M9 152 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 SMURF2Q9HAU4 748 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 ZNF229Q9UJW7 825 aa8.46□□□□□ -1.06
TRIM28-210ENST00000597618 A0A1W2PRG6 482 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 WDR91A4D1P6 747 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 GMNCA6NCL1 334 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 CLIC1O00299 241 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 SDHDO14521 159 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 TNFRSF13BO14836 293 aaPredicted RBP8.45□□□□□ -1.06
TRIM28-210ENST00000597618 BIRC5O15392 142 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 CHP2O43745 196 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 TPST1O60507 370 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 FMO6PO60774 539 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 CH25HO95992 272 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 HIST1H2ABP04908 130 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 THRBP10828 461 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 TUBG1P23258 451 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 CDAP32320 146 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 RBMXP38159 391 aaKnown RBP8.45□□□□□ -1.06
TRIM28-210ENST00000597618 PITPNBP48739 271 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 DAP3P51398 398 aaKnown RBP8.45□□□□□ -1.06
TRIM28-210ENST00000597618 FAM189A2Q15884 450 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 GCNT6Q5T4J0 391 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 REEP3Q6NUK4 255 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 SLC27A4Q6P1M0 643 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 LINC00114Q6XXX2 140 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 HIST3H2AQ7L7L0 130 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 NANOGNBQ7Z5D8 188 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 FITM2Q8N6M3 262 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 NFKBIDQ8NI38 313 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 HIST1H2ACQ93077 130 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 NABP1Q96AH0 204 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 C4orf45Q96LM5 186 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 OR2V2Q96R30 315 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 OR2H1Q9GZK4 316 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 GCM1Q9NP62 436 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 TUBG2Q9NRH3 451 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 STX18Q9P2W9 335 aaKnown RBP8.45□□□□□ -1.06
TRIM28-210ENST00000597618 UGT2A1Q9Y4X1 527 aa8.45□□□□□ -1.06
TRIM28-210ENST00000597618 PHYHO14832 338 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ENSAO43768 121 aaKnown RBP8.44□□□□□ -1.06
TRIM28-210ENST00000597618 PIP5K1CO60331 668 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 TPST2O60704 377 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 SERPINB7O75635 380 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 SLC2A10O95528 541 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 FSTL3O95633 263 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ABHD16AO95870 558 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
TRIM28-210ENST00000597618 OPN1MWP04001 364 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 VIMP08670 466 aaKnown RBP8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ASAH2BP0C7U1 165 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 OPN1MW2P0DN77 364 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 OPN1MW3P0DN78 364 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 UMPSP11172 480 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 NR2C1P13056 603 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 KITLGP21583 273 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 PCBD1P61457 104 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ERVK-25P63136 954 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 CDK6Q00534 326 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 IFFO1Q0D2I5 559 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 BST1Q10588 318 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 SGCAQ16586 387 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 RUSC1-AS1Q66K80 236 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 GDPGP1Q6ZNW5 385 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 Q6ZR03 302 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 PTOV1Q86YD1 416 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ARMC8Q8IUR7 673 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ASB10Q8WXI3 467 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 GATAD2BQ8WXI9 593 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ZNF607Q96SK3 696 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 PCGF1Q9BSM1 259 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 TRIM15Q9C019 465 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 WNT5BQ9H1J7 359 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 TMEM165Q9HC07 324 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 PNPOQ9NVS9 261 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 ZIM2Q9NZV7 527 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 CLN8Q9UBY8 286 aa8.44□□□□□ -1.06
TRIM28-210ENST00000597618 NDRG4Q9ULP0 352 aaKnown RBP8.44□□□□□ -1.06
TRIM28-210ENST00000597618 NOTCH3Q9UM47 2321 aa8.43□□□□□ -1.06
TRIM28-210ENST00000597618 LRRC30A6NM36 301 aa8.43□□□□□ -1.06
TRIM28-210ENST00000597618 TRPC5OSA6NMA1 111 aa8.43□□□□□ -1.06
TRIM28-210ENST00000597618 H0YL77 283 aa8.43□□□□□ -1.06
TRIM28-210ENST00000597618 P2RY10O00398 339 aa8.43□□□□□ -1.06
TRIM28-210ENST00000597618 KPNA4O00629 521 aaPredicted RBP8.43□□□□□ -1.06
TRIM28-210ENST00000597618 TRMUO75648 421 aaKnown RBP8.43□□□□□ -1.06
TRIM28-210ENST00000597618 IGHV4-59P01825 116 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms