RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ERICH4A6NGS2 130 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 FAM171A2A8MVW0 826 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 ANKRD65E5RJM6 399 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 MITFO75030 526 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 MPZL1O95297 269 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 GPANK1O95872 356 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 HMGN1P05114 100 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 CD53P19397 219 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 IGFBP5P24593 272 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 PYCR1P32322 319 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 APLNRP35414 380 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 FABP6P51161 128 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 LSM6P62312 80 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 ESRRGP62508 458 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 GALK2Q01415 458 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 SCRN3Q0VDG4 424 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 DBPQ10586 325 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF362Q5T0B9 420 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 OTPQ5XKR4 325 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 KDM4DQ6B0I6 523 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 SYT9Q86SS6 491 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF584Q8IVC4 421 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 ALDH16A1Q8IZ83 802 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 FBXL14Q8N1E6 418 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 SLC30A7Q8NEW0 376 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 OR1J2Q8NGS2 313 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 AKR7LQ8NHP1 331 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 TMEM171Q8WVE6 324 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 PIGTQ969N2 578 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 OTULINQ96BN8 352 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 PLEKHA8Q96JA3 519 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 DDOQ99489 341 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 OR2H1Q9GZK4 316 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 CDH20Q9HBT6 801 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 SLC25A19Q9HC21 320 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 LAMP3Q9UQV4 416 aa17.04■□□□□ 0.32
SHKBP1-214ENST00000597396 GAAP10253 952 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 PAICSP22234 425 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 APEX1P27695 318 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 CDK5Q00535 292 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 PSG4Q00888 419 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 AQP6Q13520 282 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 KCNMB1Q16558 191 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 TBC1D28Q2M2D7 210 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 TMEM236Q5W0B7 351 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 VHLLQ6RSH7 139 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 RBM4BQ9BQ04 359 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 RBM4Q9BWF3 364 aaKnown RBP17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 OSBPL10Q9BXB5 764 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 SPEF1Q9Y4P9 236 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 ARID1AO14497 2285 aa17.03■□□□□ 0.32
SHKBP1-214ENST00000597396 BAG2O95816 211 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 SLC25A1P53007 311 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 RIPPLY3P57055 190 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 TEKQ02763 1124 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 HGFACQ04756 655 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 SNTB2Q13425 540 aaKnown RBP17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 DAG1Q14118 895 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 MEP1BQ16820 701 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 AGAP6Q5VW22 663 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 KRT80Q6KB66 452 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 ZNF544Q6NX49 715 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 PQLC1Q8N2U9 271 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 SLC26A10Q8NG04 563 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 OR51L1Q8NGJ5 315 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 CIB1Q99828 191 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 WNT5BQ9H1J7 359 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 CA10Q9NS85 328 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 ASH2LQ9UBL3 628 aa17.02■□□□□ 0.32
SHKBP1-214ENST00000597396 FAM183AA6NL82 134 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 SURF4O15260 269 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 GYPBP06028 91 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 SOD3P08294 240 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 DANCRP0C864 163 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 CCL2P13500 99 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 ZNF35P13682 527 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 SPI1P17947 270 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 CCNOP22674 350 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 STOMP27105 288 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 APOBEC3AP31941 199 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 TTKP33981 857 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 GDI2P50395 445 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 PPP2R2BQ00005 443 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 PTGES3Q15185 160 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 DEFB113Q30KQ7 82 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 ZNF774Q6NX45 483 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 MUC15Q8N387 334 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 CPEB3Q8NE35 698 aaKnown RBP17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 NUP37Q8NFH4 326 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 MBD6Q96DN6 1003 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 CDADC1Q9BWV3 514 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 PRRG3Q9BZD7 231 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 NMNAT2Q9BZQ4 307 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 CXorf56Q9H5V9 222 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 MED20Q9H944 212 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 BEX4Q9NWD9 120 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 PLEK2Q9NYT0 353 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 TMEFF2Q9UIK5 374 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 ORC6Q9Y5N6 252 aa17.01■□□□□ 0.31
SHKBP1-214ENST00000597396 USF3Q68DE3 2245 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms