RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 OR51V1Q9H2C8 321 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 IMPAD1Q9NX62 359 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 ABCA4P78363 2273 aa12.5□□□□□ -0.41
VRK3-213ENST00000597215 HEATR1Q9H583 2144 aaKnown RBP12.49□□□□□ -0.41
VRK3-213ENST00000597215 E9PQ18 207 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 M0R129 80 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ABCD4O14678 606 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 TLX2O43763 284 aaPredicted RBP12.49□□□□□ -0.41
VRK3-213ENST00000597215 GLCEO94923 617 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ATP6V1G2O95670 118 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 PTHP01270 115 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 TFP02787 698 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 CECR9P0C854 216 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ZNF823P16415 610 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
VRK3-213ENST00000597215 GGT2P36268 569 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 PLP2Q04941 152 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 SCRN3Q0VDG4 424 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 RAB39AQ14964 217 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 MEP1BQ16820 701 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 KLHL12Q53G59 568 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 SLC35D3Q5M8T2 416 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.49□□□□□ -0.41
VRK3-213ENST00000597215 IL17RDQ8NFM7 739 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ZNRF4Q8WWF5 429 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 PITX2Q99697 317 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 CLEC4MQ9H2X3 399 aaPredicted RBP12.49□□□□□ -0.41
VRK3-213ENST00000597215 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 KCNG2Q9UJ96 466 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 NDRG4Q9ULP0 352 aaKnown RBP12.49□□□□□ -0.41
VRK3-213ENST00000597215 RNF115Q9Y4L5 304 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 TIMM10BQ9Y5J6 103 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 GMPPBQ9Y5P6 360 aa12.49□□□□□ -0.41
VRK3-213ENST00000597215 CADP27708 2225 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 LOC100130705A0A1B0GUX0 176 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 IQCMA0A1B0GVH7 501 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 DLGAP1O14490 977 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 CRYAAP02489 173 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 SERPINA5P05154 406 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 CELA3BP08861 270 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
VRK3-213ENST00000597215 EFNB1P98172 346 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 PSG4Q00888 419 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 PABPC1L2AQ5JQF8 200 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 LCN1P1Q5VSP4 162 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 NXNL2Q5VZ03 156 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 OTPQ5XKR4 325 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
VRK3-213ENST00000597215 ALDH16A1Q8IZ83 802 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
VRK3-213ENST00000597215 ZNF555Q8NEP9 628 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 BBS1Q8NFJ9 593 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 OR8J1Q8NGP2 316 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 TRUB1Q8WWH5 349 aaKnown RBP12.48□□□□□ -0.41
VRK3-213ENST00000597215 RADILQ96JH8 1075 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 IL4I1Q96RQ9 567 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 TMEM204Q9BSN7 226 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 CDADC1Q9BWV3 514 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 OR2H1Q9GZK4 316 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 VCX3BQ9H321 246 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 FAM118AQ9NWS6 357 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 MRPL22Q9NWU5 206 aaKnown RBP12.48□□□□□ -0.41
VRK3-213ENST00000597215 H2AFY2Q9P0M6 372 aaPredicted RBP12.48□□□□□ -0.41
VRK3-213ENST00000597215 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
VRK3-213ENST00000597215 DCHS2Q6V1P9 2916 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 SLC16A6O15403 523 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 TMCC2O75069 709 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 PRF1P14222 555 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 SLC2A5P22732 501 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 GSTT1P30711 240 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 ENTPD1P49961 510 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 ADAM8P78325 824 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 NAAAQ02083 359 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 APOFQ13790 326 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 KEAP1Q14145 624 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 ADAM5Q6NVV9 412 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 SLC22A25Q6T423 547 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 LYPD4Q6UWN0 246 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 MYPOPQ86VE0 399 aaPredicted RBP12.47□□□□□ -0.41
VRK3-213ENST00000597215 GID4Q8IVV7 300 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 ZNF511Q8NB15 262 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 GJC3Q8NFK1 279 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 OR2AJ1Q8NGZ0 328 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 AKR7LQ8NHP1 331 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 ZMYND19Q96E35 227 aaPredicted RBP12.47□□□□□ -0.41
VRK3-213ENST00000597215 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 WNT5BQ9H1J7 359 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 LHFPL6Q9Y693 200 aa12.47□□□□□ -0.41
VRK3-213ENST00000597215 CELSR2Q9HCU4 2923 aa12.46□□□□□ -0.41
VRK3-213ENST00000597215 IGHV2OR16-5A0A0B4J2B6 119 aa12.46□□□□□ -0.41
VRK3-213ENST00000597215 SLC22A31A6NKX4 558 aa12.46□□□□□ -0.41
VRK3-213ENST00000597215 SGCEO43556 437 aa12.46□□□□□ -0.41
VRK3-213ENST00000597215 DOK2O60496 412 aa12.46□□□□□ -0.41
VRK3-213ENST00000597215 PLAUP00749 431 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms