RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FBXL3Q9UKT7 428 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 SPEF1Q9Y4P9 236 aa9.6□□□□□ -0.87
LIG1-211ENST00000596457 TACC2O95359 2948 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 ARRDC5A6NEK1 342 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 SAC3D1A6NKF1 404 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 C12orf71A8MTZ7 269 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 VSTM5A8MXK1 200 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 G3V2T6 193 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 CD8AP01732 235 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 MMP7P09237 267 aaPredicted RBP9.59□□□□□ -0.87
LIG1-211ENST00000596457 FAM157BP0CG42 384 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 FCGR1AP12314 374 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OSMP13725 252 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 FOSL1P15407 271 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 PYCR1P32322 319 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 PTH2RP49190 550 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 DAPP51397 102 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 PSG4Q00888 419 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 GINS1Q14691 196 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 TMEM236Q5W0B7 351 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 ZNF774Q6NX45 483 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 ZNF544Q6NX49 715 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 FOXL2NBQ6ZUU3 175 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 HIPK1Q86Z02 1210 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 ALDH16A1Q8IZ83 802 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OR6V1Q8N148 313 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 LNX2Q8N448 690 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 CPEB3Q8NE35 698 aaKnown RBP9.59□□□□□ -0.87
LIG1-211ENST00000596457 PROKR2Q8NFJ6 384 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OR51L1Q8NGJ5 315 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OR9Q1Q8NGQ5 310 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 TRMT61AQ96FX7 289 aaKnown RBP9.59□□□□□ -0.87
LIG1-211ENST00000596457 DUS3LQ96G46 650 aaKnown RBP9.59□□□□□ -0.87
LIG1-211ENST00000596457 TRAF4Q9BUZ4 470 aaPredicted RBP9.59□□□□□ -0.87
LIG1-211ENST00000596457 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 CACNG6Q9BXT2 260 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 OR2H1Q9GZK4 316 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 WNT5BQ9H1J7 359 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 CA10Q9NS85 328 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 CBLN4Q9NTU7 201 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 FZR1Q9UM11 496 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 BAIAP2Q9UQB8 552 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 TIMM10BQ9Y5J6 103 aa9.59□□□□□ -0.87
LIG1-211ENST00000596457 IGLV1-36A0A0B4J1U3 117 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 C5orf49A4QMS7 147 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 TVP23AA6NH52 213 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 RIIAD1A6NNX1 92 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 GPRIN2O60269 458 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 IFNGP01579 166 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 GYPBP06028 91 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 LCKP06239 509 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 OR4A8P0C604 315 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 ZNF35P13682 527 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 NR4A1P22736 598 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 STOMP27105 288 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 GDI2P50395 445 aaKnown RBP9.58□□□□□ -0.88
LIG1-211ENST00000596457 ATP5J2P56134 94 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 ACTR3P61158 418 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 TEKQ02763 1124 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 CRMP1Q14194 572 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 ACSM5Q6NUN0 579 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 TMEM154Q6P9G4 183 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 CD300LDQ6UXZ3 194 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 PAQR4Q8N4S7 273 aaPredicted RBP9.58□□□□□ -0.88
LIG1-211ENST00000596457 NRBF2Q96F24 287 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 SNX18Q96RF0 628 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 CDADC1Q9BWV3 514 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 MED20Q9H944 212 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 PAPOLBQ9NRJ5 636 aaKnown RBP9.58□□□□□ -0.88
LIG1-211ENST00000596457 KRT84Q9NSB2 600 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 GDF2Q9UK05 429 aaPredicted RBP9.58□□□□□ -0.88
LIG1-211ENST00000596457 FKBP7Q9Y680 259 aa9.58□□□□□ -0.88
LIG1-211ENST00000596457 HRNRQ86YZ3 2850 aaPredicted RBP9.58□□□□□ -0.88
LIG1-211ENST00000596457 PRRC2AP48634 2157 aaKnown RBP9.57□□□□□ -0.88
LIG1-211ENST00000596457 ABCA4P78363 2273 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 FAM183AA6NL82 134 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 SGCEO43556 437 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 DOK2O60496 412 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 MITFO75030 526 aaPredicted RBP9.57□□□□□ -0.88
LIG1-211ENST00000596457 TMCC2O75069 709 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 NDUFS7O75251 213 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 CLUP10909 449 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 ZNF823P16415 610 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 ZNF3P17036 446 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 GRK5P34947 590 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 SERPINF1P36955 418 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 CRISP1P54107 249 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 SCRN3Q0VDG4 424 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 AQP6Q13520 282 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 ADIPOQQ15848 244 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 Q5PR19 223 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 SHEQ5VZ18 495 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 SLC27A4Q6P1M0 643 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 CORO6Q6QEF8 472 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 YTHDF3Q7Z739 585 aaKnown RBP9.57□□□□□ -0.88
LIG1-211ENST00000596457 DTX2Q86UW9 622 aa9.57□□□□□ -0.88
LIG1-211ENST00000596457 ZDHHC13Q8IUH4 622 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms