RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 TIPRLO75663 272 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 IFNGP01579 166 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 FASP25445 335 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 APEX1P27695 318 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 PCSK6P29122 969 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 GLO1Q04760 184 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 ENDOGQ14249 297 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 KCNMB1Q16558 191 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 SHQ1Q6PI26 577 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 ARL9Q6T311 187 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 TMEM179BQ7Z7N9 219 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 C1orf174Q8IYL3 243 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 ATG16L2Q8NAA4 619 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 WFDC11Q8NEX6 87 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 DNAJC9Q8WXX5 260 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 NIPSNAP1Q9BPW8 284 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 TEX12Q9BXU0 123 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 PLA2G12AQ9BZM1 189 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 BCL2L14Q9BZR8 327 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 EMC7Q9NPA0 242 aa14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 RPRD1BQ9NQG5 326 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 NDRG4Q9ULP0 352 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-212ENST00000596163 SOX14O95416 240 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 COX5BP10606 129 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 CCNOP22674 350 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 EVX1P49640 407 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 SELENOVP59797 346 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 AQP6Q13520 282 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 CCNIQ14094 377 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 ATP6AP1Q15904 470 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 MST1LQ2TV78 715 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 UGT2A3Q6UWM9 527 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 ZBTB46Q86UZ6 589 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 HIPK1Q86Z02 1210 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 OR6V1Q8N148 313 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 NPEPL1Q8NDH3 523 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 CPEB3Q8NE35 698 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 SDR9C7Q8NEX9 313 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 OR10H5Q8NGA6 315 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 OR8D4Q8NGM9 314 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 OR2T4Q8NH00 348 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 OR5K1Q8NHB7 308 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 AKR7LQ8NHP1 331 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 C11orf40Q8WZ69 217 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 UTP4Q969X6 686 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 FOXN4Q96NZ1 517 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 TSSK2Q96PF2 358 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 TMUB1Q9BVT8 246 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 WNT5BQ9H1J7 359 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 POLR1DQ9Y2S0 133 aa14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 PRRC2AP48634 2157 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 HEATR1Q9H583 2144 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-212ENST00000596163 AKAP9Q99996 3911 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 IGLV1-36A0A0B4J1U3 117 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 C5orf49A4QMS7 147 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 OR6C68A6NDL8 312 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 RIIAD1A6NNX1 92 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 SGCEO43556 437 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 SCG5P05408 212 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 ERCC1P07992 297 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 CCL2P13500 99 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 OSMP13725 252 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 FOSL1P15407 271 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 UCP2P55851 309 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 RGS7BPQ6MZT1 257 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 MRPL24Q96A35 216 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 POM121L2Q96KW2 1035 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 Q96MF0 132 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 CDADC1Q9BWV3 514 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 KIF17Q9P2E2 1029 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 REV1Q9UBZ9 1251 aa14.91□□□□□ -0.02
SHKBP1-212ENST00000596163 HLA-DQA2P01906 255 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 TP53P04637 393 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 LCKP06239 509 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 IGFBP1P08833 259 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 ZNF3P17036 446 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 PRKACGP22612 351 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 POU1F1P28069 291 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 GRK5P34947 590 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 PPOXP50336 477 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 NUDT6P53370 316 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 DSCR9P59020 149 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 MOGQ16653 247 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 ZNF774Q6NX45 483 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 SLC27A4Q6P1M0 643 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 KRTAP1-3Q8IUG1 177 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 SLC37A3Q8NCC5 494 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 PROKR2Q8NFJ6 384 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 GJC3Q8NFK1 279 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 OR4Q3Q8NH05 313 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 DOK1Q99704 481 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 RAB1BQ9H0U4 201 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 ELOVL3Q9HB03 270 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 NTN4Q9HB63 628 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 PLEK2Q9NYT0 353 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 ASH2LQ9UBL3 628 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 GPR160Q9UJ42 338 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 KCNG2Q9UJ96 466 aa14.9□□□□□ -0.02
SHKBP1-212ENST00000596163 G3V2T6 193 aa14.89□□□□□ -0.03
SHKBP1-212ENST00000596163 DCTN6O00399 190 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms