RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 INIPQ9NRY2 104 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 SOX21Q9Y651 276 aaPredicted RBP8.39□□□□□ -1.07
LIG1-209ENST00000596104 ARHGAP32A7KAX9 2087 aa8.39□□□□□ -1.07
LIG1-209ENST00000596104 TGDSO95455 350 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 IGF2P01344 180 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 MT-ND1P03886 318 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 IGHV4-38-2P0DP08 117 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 FUT1P19526 365 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 MDKP21741 143 aaPredicted RBP8.38□□□□□ -1.07
LIG1-209ENST00000596104 CD80P33681 288 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 BTG1P62324 171 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 ERVK-25P63136 954 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 PAX2Q02962 417 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 PSG7Q13046 419 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 ZMYND11Q15326 602 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 SGCAQ16586 387 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 CYP51A1Q16850 503 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 AGKQ53H12 422 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 ZMAT1Q5H9K5 638 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 Q6ZR03 302 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 FOXL2NBQ6ZUU3 175 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 C9orf139Q6ZV77 190 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 NKAIN4Q8IVV8 208 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 KLHL36Q8N4N3 616 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 PFN4Q8NHR9 129 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 LIPHQ8WWY8 451 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 NSMAFQ92636 917 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 SAMD8Q96LT4 415 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 C7orf26Q96N11 449 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 CCDC28BQ9BUN5 200 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 NANOGQ9H9S0 305 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 C20orf141Q9NUB4 165 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 NKIRAS1Q9NYS0 192 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 STX18Q9P2W9 335 aaKnown RBP8.38□□□□□ -1.07
LIG1-209ENST00000596104 RAB21Q9UL25 225 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 MMP24Q9Y5R2 645 aa8.38□□□□□ -1.07
LIG1-209ENST00000596104 VWFP04275 2813 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 A0A0G2JK05 382 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 CEACAM18A8MTB9 384 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 TIMM8AO60220 97 aaPredicted RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 PLATP00750 562 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 CST2P09228 141 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 PPIAL4GP0DN37 164 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 LAP3P28838 519 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 PCGF2P35227 344 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 RBM34P42696 430 aaKnown RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 MTPNP58546 118 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 MAGOHP61326 146 aaKnown RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 CD47Q08722 323 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 ENDOGQ14249 297 aaKnown RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 TAF11Q15544 211 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 ZNF774Q6NX45 483 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 DHDDSQ86SQ9 333 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 PATL1Q86TB9 770 aaKnown RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 JAZF1Q86VZ6 243 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 PARP8Q8N3A8 854 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 DPP10Q8N608 796 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 TMEM255BQ8WV15 326 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 DACT3Q96B18 629 aaPredicted RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 TMIGD2Q96BF3 282 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 UPRTQ96BW1 309 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 TLCD1Q96CP7 247 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 SGTBQ96EQ0 304 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 C4orf45Q96LM5 186 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 CGREF1Q99674 301 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 MS4A7Q9GZW8 240 aaPredicted RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 TXNIPQ9H3M7 391 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 POFUT1Q9H488 388 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 KAT8Q9H7Z6 458 aaKnown RBP8.37□□□□□ -1.07
LIG1-209ENST00000596104 ELOVL3Q9HB03 270 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 TIMM10BQ9Y5J6 103 aa8.37□□□□□ -1.07
LIG1-209ENST00000596104 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 GMNCA6NCL1 334 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 TMEM178BH3BS89 294 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 GPANK1O95872 356 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 WNT2P09544 360 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 NR2C1P13056 603 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 TNFRSF1AP19438 455 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 KITLGP21583 273 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 OMGP23515 440 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 MDH2P40926 338 aaKnown RBP8.36□□□□□ -1.07
LIG1-209ENST00000596104 MTNR1AP48039 350 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 GZMMP51124 257 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 ARHGDIAP52565 204 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 LAPTM4AQ15012 233 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 ESCO2Q56NI9 601 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 C16orf87Q6PH81 154 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 CCDC80Q76M96 950 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 ZER1Q7Z7L7 766 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 SLC30A8Q8IWU4 369 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 CLDN22Q8N7P3 220 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 OR2Z1Q8NG97 314 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 OR52E2Q8NGJ4 325 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 TMEM239Q8WW34 195 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 ITLN1Q8WWA0 313 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 WFDC12Q8WWY7 111 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 ALG12Q9BV10 488 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 PRDM13Q9H4Q3 707 aa8.36□□□□□ -1.07
LIG1-209ENST00000596104 MAN2C1Q9NTJ4 1040 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms