RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PNPP00491 289 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 ISG15P05161 165 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 CTSBP07858 339 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 ACHEP22303 614 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 ZBTB25P24278 435 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 PBX2P40425 430 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 MC2RQ01718 297 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 PMPCAQ10713 525 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 ODF4Q2M2E3 257 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 PAN3Q58A45 887 aaKnown RBP11.92□□□□□ -0.5
VRK3-209ENST00000594948 Q6ZSR6 202 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 NDUFAF7Q7L592 441 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 TMED4Q7Z7H5 227 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 LYG2Q86SG7 212 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 ZBTB8AQ96BR9 441 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
VRK3-209ENST00000594948 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
VRK3-209ENST00000594948 KCNK15Q9H427 330 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 TMEM185BQ9H7F4 350 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 MSRAQ9UJ68 235 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 PURGQ9UJV8 347 aaKnown RBP11.92□□□□□ -0.5
VRK3-209ENST00000594948 SLC22A13Q9Y226 551 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 PRELID3BQ9Y3B1 194 aa11.92□□□□□ -0.5
VRK3-209ENST00000594948 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 A0A1W2PQD3 144 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 FRG2CA6NGY1 282 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 NUDT19A8MXV4 375 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 C10orf142B7Z368 130 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 SRSF10O75494 262 aaKnown RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 MAOAP21397 527 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 RPS27P42677 84 aaKnown RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 PPIAP62937 165 aaKnown RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 ELOCQ15369 112 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 PDSS1Q5T2R2 415 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 ZNF627Q7L945 461 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 OR2W3Q7Z3T1 314 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 LYPD6Q86Y78 171 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 FRMD1Q8N878 549 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 PLPP7Q8NBV4 271 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 BPIFCQ8NFQ6 507 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 METTL21AQ8WXB1 218 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 ATOH1Q92858 354 aaPredicted RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 TXNIPQ9H3M7 391 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 MRPL22Q9NWU5 206 aaKnown RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 TAS2R4Q9NYW5 299 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 HHLA2Q9UM44 414 aa11.91□□□□□ -0.5
VRK3-209ENST00000594948 NOP16Q9Y3C1 178 aaKnown RBP11.91□□□□□ -0.5
VRK3-209ENST00000594948 OR14I1A6ND48 311 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 M0QYG6 137 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 EIF1AYO14602 144 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 ALOX12BO75342 701 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 TBPP20226 339 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 CXCR1P25024 350 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 DLSTP36957 453 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 EIF1AXP47813 144 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 SLC37A1P57057 533 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 SRSF5Q13243 272 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 ERV3-1Q14264 604 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 KCNAB1Q14722 419 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 GLYATL3Q5SZD4 288 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 PAPD4Q6PIY7 484 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 ZNF584Q8IVC4 421 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 AVL9Q8NBF6 648 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 OR52N5Q8NH56 324 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 STOML3Q8TAV4 291 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 MITD1Q8WV92 249 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 AQP3Q92482 292 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 PMEPA1Q969W9 287 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 MARC2Q969Z3 335 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 TCTN2Q96GX1 697 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 SLC25A44Q96H78 314 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 MRGPRX1Q96LB2 322 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 LMF1Q96S06 567 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 SLC6A7Q99884 636 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 NUDT16L1Q9BRJ7 211 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 WDR13Q9H1Z4 485 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 GAREM1Q9H706 876 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 NDRG3Q9UGV2 375 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ZNF230Q9UIE0 474 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 KLK13Q9UKR3 277 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 R4GMQ9 66 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 C17orf105B2RV13 164 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 H0YIG0 161 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 FGF16O43320 207 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 SIGLEC6O43699 453 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 SCGNO76038 276 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 DXOO77932 396 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 GPANK1O95872 356 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 HLA-AP01891 365 aaKnown RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 HLA-DQA2P01906 255 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 SPARCP09486 303 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 RORAP35398 523 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 ARRB1P49407 418 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 DCAF7P61962 342 aa11.9□□□□□ -0.5
VRK3-209ENST00000594948 INSM1Q01101 510 aaPredicted RBP11.9□□□□□ -0.5
VRK3-209ENST00000594948 HHEXQ03014 270 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms