RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 RNF148Q8N7C7 305 aa20.05■□□□□ 0.8
LSM4-204ENST00000594828 ZNF416Q9BWM5 594 aa20.05■□□□□ 0.8
LSM4-204ENST00000594828 NKIRAS2Q9NYR9 191 aa20.05■□□□□ 0.8
LSM4-204ENST00000594828 C12orf71A8MTZ7 269 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 CDC14BO60729 498 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 PTP4A3O75365 173 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 GLO1Q04760 184 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 ENDOGQ14249 297 aaKnown RBP20.04■□□□□ 0.8
LSM4-204ENST00000594828 FGD3Q5JSP0 725 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 SPATA46Q5T0L3 261 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 ZNF774Q6NX45 483 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 FAM122BQ7Z309 247 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 C1orf174Q8IYL3 243 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 CLDND2Q8NHS1 167 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 MARS2Q96GW9 593 aaKnown RBP20.04■□□□□ 0.8
LSM4-204ENST00000594828 C7orf34Q96L11 122 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 ZNF570Q96NI8 536 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 NARFLQ9H6Q4 476 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 POLE4Q9NR33 117 aa20.04■□□□□ 0.8
LSM4-204ENST00000594828 TMEFF2Q9UIK5 374 aaPredicted RBP20.04■□□□□ 0.8
LSM4-204ENST00000594828 PRSS37A4D1T9 235 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 RP2O75695 350 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 NDUFB2O95178 105 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 SCG5P05408 212 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 MESTQ5EB52 335 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 ABHD4Q8TB40 342 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 SLC25A40Q8TBP6 338 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 WACQ9BTA9 647 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 OR2J1Q9GZK6 312 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 RACGAP1Q9H0H5 632 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 GORASP2Q9H8Y8 452 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 DECR2Q9NUI1 292 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 SIGLEC7Q9Y286 467 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 ATRQ13535 2644 aa20.03■□□□□ 0.8
LSM4-204ENST00000594828 B4DSR2 109 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 TPD52L2O43399 206 aaKnown RBP20.02■□□□□ 0.8
LSM4-204ENST00000594828 DIRAS1O95057 198 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 CRYBB2P43320 205 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 OMPP47874 163 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 LIMS1P48059 325 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 TEKQ02763 1124 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 KRT72Q14CN4 511 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 MBNL2Q5VZF2 373 aaKnown RBP20.02■□□□□ 0.8
LSM4-204ENST00000594828 PHC2Q8IXK0 858 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 FAM86B1Q8N7N1 296 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 KLF14Q8TD94 323 aaPredicted RBP20.02■□□□□ 0.8
LSM4-204ENST00000594828 GTF3AQ92664 365 aaKnown RBP20.02■□□□□ 0.8
LSM4-204ENST00000594828 C4orf45Q96LM5 186 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 ELOVL3Q9HB03 270 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 EMC7Q9NPA0 242 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 KRCC1Q9NPI7 259 aaPredicted RBP20.02■□□□□ 0.8
LSM4-204ENST00000594828 AURKCQ9UQB9 309 aa20.02■□□□□ 0.8
LSM4-204ENST00000594828 TEX13CA0A0J9YWL9 993 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 TRBV4-1A0A0J9YWV2 114 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 WNT9BO14905 357 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 ICMTO60725 284 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 NGFP01138 241 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 ITGA2P17301 1181 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 MPV17P39210 176 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 ZNF81P51508 661 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 DVL1P1P54792 670 aaPredicted RBP20.01■□□□□ 0.79
LSM4-204ENST00000594828 PPP1CBP62140 327 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 TSTQ16762 297 aaKnown RBP20.01■□□□□ 0.79
LSM4-204ENST00000594828 GPR139Q6DWJ6 353 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 ARL9Q6T311 187 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 RFPL4BQ6ZWI9 263 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 OR52J3Q8NH60 311 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 IPCEF1Q8WWN9 437 aaPredicted RBP20.01■□□□□ 0.79
LSM4-204ENST00000594828 RSRC1Q96IZ7 334 aaKnown RBP20.01■□□□□ 0.79
LSM4-204ENST00000594828 NRIP3Q9NQ35 241 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 TREM2Q9NZC2 230 aa20.01■□□□□ 0.79
LSM4-204ENST00000594828 NDRG4Q9ULP0 352 aaKnown RBP20.01■□□□□ 0.79
LSM4-204ENST00000594828 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.01■□□□□ 0.798e-7■■■■■ 27.2
LSM4-204ENST00000594828 IGHV1-69-2A0A0G2JMI3 117 aa20■□□□□ 0.79
LSM4-204ENST00000594828 PLSCR5A0PG75 271 aa20■□□□□ 0.79
LSM4-204ENST00000594828 TFP02787 698 aa20■□□□□ 0.79
LSM4-204ENST00000594828 CTLA4P16410 223 aa20■□□□□ 0.79
LSM4-204ENST00000594828 SDHAP31040 664 aa20■□□□□ 0.79
LSM4-204ENST00000594828 ARHGDIAP52565 204 aa20■□□□□ 0.79
LSM4-204ENST00000594828 SCRN3Q0VDG4 424 aa20■□□□□ 0.79
LSM4-204ENST00000594828 KRR1Q13601 381 aaKnown RBP20■□□□□ 0.79
LSM4-204ENST00000594828 SEC23BQ15437 767 aa20■□□□□ 0.79
LSM4-204ENST00000594828 RASD2Q96D21 266 aa20■□□□□ 0.79
LSM4-204ENST00000594828 PYURFQ96I23 114 aa20■□□□□ 0.79
LSM4-204ENST00000594828 GPX7Q96SL4 187 aaPredicted RBP20■□□□□ 0.79
LSM4-204ENST00000594828 RERGLQ9H628 205 aa20■□□□□ 0.79
LSM4-204ENST00000594828 IL20RAQ9UHF4 553 aa20■□□□□ 0.79
LSM4-204ENST00000594828 V9GYQ6 96 aa20■□□□□ 0.79
LSM4-204ENST00000594828 COL6A5A8TX70 2615 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 UNC119BA6NIH7 251 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 SPRY3O43610 288 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 SLC16A7O60669 478 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 COX5BP10606 129 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 HSD17B1P14061 328 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 PCMT1P22061 227 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 MMP15P51511 669 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 THSD4Q6ZMP0 1018 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 DPY19L2P2Q6ZN68 376 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 USP51Q70EK9 711 aa19.99■□□□□ 0.79
LSM4-204ENST00000594828 DHRS1Q96LJ7 313 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms