RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 DOK1Q99704 481 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 BCL7BQ9BQE9 202 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 LINC00470Q9BZP3 86 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 ISG20L2Q9H9L3 353 aaKnown RBP11.89□□□□□ -0.51
VMP1-217ENST00000593168 B3GAT2Q9NPZ5 323 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 CLCF1Q9UBD9 225 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 KCNG2Q9UJ96 466 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 ENPP5Q9UJA9 477 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 LAMP5Q9UJQ1 280 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 UGT2A1Q9Y4X1 527 aa11.89□□□□□ -0.51
VMP1-217ENST00000593168 J3QLW9 94 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 SULT1C4O75897 302 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 MPZL1O95297 269 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 TGM6O95932 706 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 SPARCP09486 303 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 ZNF19P17023 458 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 GUCA1AP43080 201 aaPredicted RBP11.88□□□□□ -0.51
VMP1-217ENST00000593168 GTF2A1P52655 376 aaPredicted RBP11.88□□□□□ -0.51
VMP1-217ENST00000593168 RIPPLY3P57055 190 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 OR12D2P58182 307 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 EGR3Q06889 387 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 GPR50Q13585 617 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 STK11Q15831 433 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 SLC18B1Q6NT16 456 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 VASH1Q7L8A9 365 aaPredicted RBP11.88□□□□□ -0.51
VMP1-217ENST00000593168 P2RY8Q86VZ1 359 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 KLBQ86Z14 1044 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 GPR137CQ8N3F9 429 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 OR10H5Q8NGA6 315 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 ASB17Q8WXJ9 295 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 UFD1Q92890 307 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 C4orf36Q96KX1 117 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 FOXN4Q96NZ1 517 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 ULBP2Q9BZM5 246 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 TRIM36Q9NQ86 728 aa11.88□□□□□ -0.51
VMP1-217ENST00000593168 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 A0A1W2PPL8 197 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 HSPB2A8KAH6 182 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 LRRTM2O43300 516 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 NOL3O60936 208 aaKnown RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 UPK3AO75631 287 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 GABARAPO95166 117 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 LALBAP00709 142 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 TACSTD2P09758 323 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 GRNP28799 593 aaKnown RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 PTGER4P35408 488 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 ZNF84P51523 738 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 GBX2P52951 348 aaPredicted RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 TAS2R43P59537 309 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 LSM6P62312 80 aaKnown RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 HSPB2Q16082 182 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 SSX1Q16384 188 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 MEP1BQ16820 701 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 TIMM50Q3ZCQ8 353 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 KCTD18Q6PI47 426 aaPredicted RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 PLXDC2Q6UX71 529 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 SLC16A12Q6ZSM3 486 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 P4HA3Q7Z4N8 544 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 FGD2Q7Z6J4 655 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 PHC2Q8IXK0 858 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 RFLNBQ8N5W9 214 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 WNT2BQ93097 391 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 ISOC1Q96CN7 298 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 GMPPAQ96IJ6 420 aaPredicted RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 TTYH2Q9BSA4 534 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
VMP1-217ENST00000593168 SLCO5A1Q9H2Y9 848 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 SEC61A2Q9H9S3 476 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 CALHM2Q9HA72 323 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 POLE4Q9NR33 117 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 KLHDC2Q9Y2U9 406 aa11.87□□□□□ -0.51
VMP1-217ENST00000593168 POLEQ07864 2286 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 METTL15A6NJ78 407 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 CD8B2A6NJW9 211 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 KRT8P05787 483 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 PSKH1P11801 424 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 GABRA1P14867 456 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 CD53P19397 219 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 NPR2P20594 1047 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 PSMA1P25786 263 aaKnown RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 RPS27P42677 84 aaKnown RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 MRPS34P82930 218 aaKnown RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 ROM1Q03395 351 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 CCDC58Q4VC31 144 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 TP53I3Q53FA7 332 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 TSPO2Q5TGU0 170 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 NSUN5P2Q63ZY6 315 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 SP5Q6BEB4 398 aaPredicted RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 GDPGP1Q6ZNW5 385 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 THEM6Q8WUY1 208 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 C12orf43Q96C57 262 aaKnown RBP11.86□□□□□ -0.51
VMP1-217ENST00000593168 OR8B4Q96RC9 309 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 TRIB1Q96RU8 372 aa11.86□□□□□ -0.51
VMP1-217ENST00000593168 ABHD6Q9BV23 337 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms