RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 POMPQ9Y244 141 aa13.52□□□□□ -0.25
LIG3-215ENST00000592690 COA3Q9Y2R0 106 aaPredicted RBP13.52□□□□□ -0.25
LIG3-215ENST00000592690 CDH10Q9Y6N8 788 aa13.52□□□□□ -0.25
LIG3-215ENST00000592690 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 ARPC3O15145 178 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 GSC2O15499 205 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 MPZL1O95297 269 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 LY6G6DO95868 133 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 GPANK1O95872 356 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 HIST1H1CP16403 213 aaKnown RBP13.51□□□□□ -0.25
LIG3-215ENST00000592690 CCNOP22674 350 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 STOMP27105 288 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 ERFP50548 548 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 RPS23P62266 143 aaKnown RBP13.51□□□□□ -0.25
LIG3-215ENST00000592690 ZNF774Q6NX45 483 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 CLEC9AQ6UXN8 241 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 SPATA24Q86W54 205 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 OR1J2Q8NGS2 313 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 POM121L2Q96KW2 1035 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 REG4Q9BYZ8 158 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 FN3KQ9H479 309 aa13.51□□□□□ -0.25
LIG3-215ENST00000592690 SETD2Q9BYW2 2564 aaPredicted RBP13.5□□□□□ -0.25
LIG3-215ENST00000592690 C12orf71A8MTZ7 269 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 F12P00748 615 aaPredicted RBP13.5□□□□□ -0.25
LIG3-215ENST00000592690 CST1P01037 141 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 PCBD1P61457 104 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 MICAQ29983 383 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 RGS7BPQ6MZT1 257 aaPredicted RBP13.5□□□□□ -0.25
LIG3-215ENST00000592690 CLEC2AQ6UVW9 174 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 RASSF6Q6ZTQ3 369 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 TMEM179BQ7Z7N9 219 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 JAZF1Q86VZ6 243 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 GLB1L2Q8IW92 636 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 ZNF101Q8IZC7 436 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 SDR9C7Q8NEX9 313 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 OR10H5Q8NGA6 315 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 OR52L1Q8NGH7 329 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 RHNO1Q9BSD3 238 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 LRMDAQ9H2I8 198 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 DYNLRB1Q9NP97 96 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 TIMM10BQ9Y5J6 103 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 FKBP7Q9Y680 259 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 TLN2Q9Y4G6 2542 aa13.5□□□□□ -0.25
LIG3-215ENST00000592690 CSPG4Q6UVK1 2322 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 IGLV1-36A0A0B4J1U3 117 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 TCRBV3S1A0A5B6 114 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 OR6C68A6NDL8 312 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 BHLHE40O14503 412 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 SOX14O95416 240 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 CLPTM1O96005 669 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 RENP00797 406 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 TP53P04637 393 aaPredicted RBP13.49□□□□□ -0.25
LIG3-215ENST00000592690 LCKP06239 509 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 HEXAP06865 529 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 ADRA2AP08913 450 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 GAAP10253 952 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 PCSK6P29122 969 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 NOS3P29474 1203 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 WNT5AP41221 380 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 CENPAP49450 140 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
LIG3-215ENST00000592690 UCP2P55851 309 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.49□□□□□ -0.25
LIG3-215ENST00000592690 MAD2L1BPQ15013 274 aaPredicted RBP13.49□□□□□ -0.25
LIG3-215ENST00000592690 MEP1BQ16820 701 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 SLC35F1Q5T1Q4 408 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 RPL13AP3Q6NVV1 102 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 SYT9Q86SS6 491 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 OR6V1Q8N148 313 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 ICA1LQ8NDH6 482 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 OR10G2Q8NGC3 310 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 OR52E2Q8NGJ4 325 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 C11orf40Q8WZ69 217 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 FAM168AQ92567 244 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 SNX18Q96RF0 628 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 DGCR6LQ9BY27 220 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 RAB1BQ9H0U4 201 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 TPK1Q9H3S4 243 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 SRA1Q9HD15 236 aaKnown RBP13.49□□□□□ -0.25
LIG3-215ENST00000592690 RPRD1BQ9NQG5 326 aaKnown RBP13.49□□□□□ -0.25
LIG3-215ENST00000592690 IL20Q9NYY1 176 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 B9D1Q9UPM9 204 aa13.49□□□□□ -0.25
LIG3-215ENST00000592690 ABCA1O95477 2261 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 A0A096LNT2 108 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 M0R233 179 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 SYNGR3O43761 229 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 IDH3BO43837 385 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 DOK2O60496 412 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 FKBP6O75344 327 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 CRABP1P29762 137 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 RAD52P43351 418 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 EVX1P49640 407 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 RIPPLY3P57055 190 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 DSCR9P59020 149 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 KRTAP1-1Q07627 177 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 SCRN3Q0VDG4 424 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 AQP6Q13520 282 aa13.48□□□□□ -0.25
LIG3-215ENST00000592690 DNM1P34Q6PK57 102 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms