RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 C2orf68Q2NKX9 166 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 LRRC23Q53EV4 343 aaPredicted RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 PABPC1L2AQ5JQF8 200 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 ARMC4Q5T2S8 1044 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 REP15Q6BDI9 236 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 NANOGP8Q6NSW7 305 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 CGB2Q6NT52 195 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 TMEM53Q6P2H8 277 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 RFPL4BQ6ZWI9 263 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 USP51Q70EK9 711 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 CCDC80Q76M96 950 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 HIST3H2AQ7L7L0 130 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 CALHM3Q86XJ0 350 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 SLC30A8Q8IWU4 369 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 MICU2Q8IYU8 434 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 ZNF101Q8IZC7 436 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 AKR7LQ8NHP1 331 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 SYNPRQ8TBG9 265 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 IPCEF1Q8WWN9 437 aaPredicted RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 STON2Q8WXE9 905 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 HIST1H2ACQ93077 130 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 NMD3Q96D46 503 aaKnown RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 SGTBQ96EQ0 304 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 MPP4Q96JB8 637 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 SEPHS2Q99611 448 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 TMEM120AQ9BXJ8 343 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 MRPL13Q9BYD1 178 aaKnown RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 MS4A5Q9H3V2 200 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 RABEP2Q9H5N1 569 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 DENND2DQ9H6A0 471 aaPredicted RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 ZNF665Q9H7R5 613 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 HINT3Q9NQE9 182 aaKnown RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 NECAP2Q9NVZ3 263 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 DCAF16Q9NXF7 216 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 PLEK2Q9NYT0 353 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 FBXL3Q9UKT7 428 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 RNF114Q9Y508 228 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 SOX21Q9Y651 276 aaPredicted RBP6.25□□□□□ -1.41
VAT1-209ENST00000592388 DNAH3Q8TD57 4116 aa6.25□□□□□ -1.41
VAT1-209ENST00000592388 A0A1W2PRG6 482 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 ZSCAN5BA6NJL1 495 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 HMGB1P1B2RPK0 211 aaPredicted RBP6.24□□□□□ -1.41
VAT1-209ENST00000592388 H7C1C5 153 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 MRASO14807 208 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 SPRY3O43610 288 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 SASH3O75995 380 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 SNAP29O95721 258 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 MAKP20794 623 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 APLNRP35414 380 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 YAP1P46937 504 aaKnown RBP6.24□□□□□ -1.41
VAT1-209ENST00000592388 ZNF84P51523 738 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 ZNF133P52736 654 aaPredicted RBP6.24□□□□□ -1.41
VAT1-209ENST00000592388 UCP2P55851 309 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 LCN6P62502 163 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 LAPTM4AQ15012 233 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 SLC36A2Q495M3 483 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 OXLD1Q5BKU9 147 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 ARMCX4Q5H9R4 360 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 C10orf128Q5T292 105 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 INTS11Q5TA45 600 aaKnown RBP6.24□□□□□ -1.41
VAT1-209ENST00000592388 OTPQ5XKR4 325 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 TMEM154Q6P9G4 183 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 OR1J1Q8NGS3 322 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 ZNF519Q8TB69 540 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 SNX33Q8WV41 574 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 TMEM239Q8WW34 195 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 GEMIN6Q8WXD5 167 aaKnown RBP6.24□□□□□ -1.41
VAT1-209ENST00000592388 ITFG2Q969R8 447 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 SLC19A3Q9BZV2 496 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 POFUT1Q9H488 388 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 INIPQ9NRY2 104 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 C1RLQ9NZP8 487 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 RHCGQ9UBD6 479 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 RIMS3Q9UJD0 308 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 ZNF346Q9UL40 294 aaKnown RBP6.24□□□□□ -1.41
VAT1-209ENST00000592388 BOLA1Q9Y3E2 137 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 WIPI2Q9Y4P8 454 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 PCDHGB5Q9Y5G0 923 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
VAT1-209ENST00000592388 LOC100509620A0A075B734 347 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 IGHV3OR16-10A0A075B7F0 116 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 TRAV27A0A087WT01 109 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 IGHV1-69-2A0A0G2JMI3 117 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 IQCMA0A1B0GVH7 501 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 C5orf49A4QMS7 147 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 C5orf63A6NC05 138 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 FAM220BPB1ANY3 271 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 J3KTA2 159 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 HOXA3O43365 443 aaPredicted RBP6.23□□□□□ -1.41
VAT1-209ENST00000592388 TPD52L2O43399 206 aaKnown RBP6.23□□□□□ -1.41
VAT1-209ENST00000592388 DEAF1O75398 565 aaPredicted RBP6.23□□□□□ -1.41
VAT1-209ENST00000592388 OR5F1O95221 314 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 PPP1R3DO95685 299 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 IGHV1-46P01743 117 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 IGHV2-5P01817 119 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 OPN1MWP04001 364 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 TSPAN19P0C672 248 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 OPN1MW2P0DN77 364 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 OPN1MW3P0DN78 364 aa6.23□□□□□ -1.41
VAT1-209ENST00000592388 IFI30P13284 250 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms