RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 COA3Q9Y2R0 106 aaPredicted RBP8.71□□□□□ -1.02
BRCA1-227ENST00000591849 CDH10Q9Y6N8 788 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 ARID1AO14497 2285 aa8.71□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF469Q96JG9 3925 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 A0A1W2PPW3 197 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 C5orf49A4QMS7 147 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 FAM171A2A8MVW0 826 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 H3BN98 237 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 H7C417 338 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 ARPC3O15145 178 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 GPRIN2O60269 458 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 IGHV4-39P01824 125 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 MMP7P09237 267 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF35P13682 527 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 HIST1H1CP16403 213 aaKnown RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 CTLA4P16410 223 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 EFNA4P52798 201 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 DSCR9P59020 149 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 PSG4Q00888 419 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 EFNB3Q15768 340 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 SWI5Q1ZZU3 235 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 SLC36A3Q495N2 470 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 C1orf146Q5VVC0 180 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 RGS7BPQ6MZT1 257 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 RASSF6Q6ZTQ3 369 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 PTCHD4Q6ZW05 846 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 SYT9Q86SS6 491 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 NABP1Q96AH0 204 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF75AQ96N20 296 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 NMNAT3Q96T66 252 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 SYT3Q9BQG1 590 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 WACQ9BTA9 647 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF416Q9BWM5 594 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 CDADC1Q9BWV3 514 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 BCL2L14Q9BZR8 327 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 OR2H1Q9GZK4 316 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 HEATR1Q9H583 2144 aaKnown RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 RPRD1BQ9NQG5 326 aaKnown RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 VNN3Q9NY84 501 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 PDP1Q9P0J1 537 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 FZR1Q9UM11 496 aa8.7□□□□□ -1.02
BRCA1-227ENST00000591849 NSD1Q96L73 2696 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-227ENST00000591849 SGCEO43556 437 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 FKBP6O75344 327 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 SOX14O95416 240 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 F12P00748 615 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-227ENST00000591849 IFNGP01579 166 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 ADRA2AP08913 450 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 POU1F1P28069 291 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 GCH1P30793 250 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 HTR5AP47898 357 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 UCP2P55851 309 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 FXYD6P3P58550 94 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 GLO1Q04760 184 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.69□□□□□ -1.02
BRCA1-227ENST00000591849 COX10Q12887 443 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 TNK1Q13470 666 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 MOGQ16653 247 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 NKPD1Q17RQ9 610 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 MST1LQ2TV78 715 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF774Q6NX45 483 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 UGT2A3Q6UWM9 527 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 KRTAP1-3Q8IUG1 177 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 ZNF584Q8IVC4 421 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 ATG16L2Q8NAA4 619 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 CPEB3Q8NE35 698 aaKnown RBP8.69□□□□□ -1.02
BRCA1-227ENST00000591849 SDR9C7Q8NEX9 313 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 OR2T33Q8NG76 320 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 OR1J1Q8NGS3 322 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 OR2AJ1Q8NGZ0 328 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 SYNPRQ8TBG9 265 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 TEX47Q8TBZ9 253 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 SNX33Q8WV41 574 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 FAM168AQ92567 244 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 MRPL24Q96A35 216 aaKnown RBP8.69□□□□□ -1.02
BRCA1-227ENST00000591849 OTULINQ96BN8 352 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 TSSK2Q96PF2 358 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 SNX18Q96RF0 628 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 FEVQ99581 238 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 TEX12Q9BXU0 123 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 DGCR6LQ9BY27 220 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 MRPL37Q9BZE1 423 aaKnown RBP8.69□□□□□ -1.02
BRCA1-227ENST00000591849 WNT5BQ9H1J7 359 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 ELOVL3Q9HB03 270 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 PLEK2Q9NYT0 353 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 KIF17Q9P2E2 1029 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 DNAJB9Q9UBS3 223 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 REV1Q9UBZ9 1251 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 KLHL21Q9UJP4 597 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 NDRG4Q9ULP0 352 aaKnown RBP8.69□□□□□ -1.02
BRCA1-227ENST00000591849 B9D1Q9UPM9 204 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 BAIAP2Q9UQB8 552 aa8.69□□□□□ -1.02
BRCA1-227ENST00000591849 TCRBV3S1A0A5B6 114 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 RIIAD1A6NNX1 92 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 RNF223E7ERA6 249 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 M0R233 179 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 EBAG9O00559 213 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 SYNGR3O43761 229 aa8.68□□□□□ -1.02
BRCA1-227ENST00000591849 DOK2O60496 412 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms