RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 NPRL2Q8WTW4 380 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 U2AF1L4Q8WU68 220 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 PHF10Q8WUB8 498 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 BCL2L2Q92843 193 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 ZNF707Q96C28 371 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 SH3YL1Q96HL8 342 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 PPP1R16AQ96I34 528 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 C14orf144Q96I85 54 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 CELF6Q96J87 481 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 MS4A14Q96JA4 679 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 POM121L2Q96KW2 1035 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 SPATA33Q96N06 139 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 OR2V2Q96R30 315 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 HBEGFQ99075 208 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 C20orf24Q9BUV8 137 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 ZNF426Q9BUY5 554 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 BEX2Q9BXY8 128 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 FAM49AQ9H0Q0 323 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 DPEP2Q9H4A9 486 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 ELOVL6Q9H5J4 265 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 FAM96AQ9H5X1 160 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 ZDHHC6Q9H6R6 413 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 MTHFD2LQ9H903 347 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 CACYBPQ9HB71 228 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 NLE1Q9NVX2 485 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 VNN3Q9NY84 501 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 PAK5Q9P286 719 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 PISDQ9UG56 409 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 KIF25Q9UIL4 384 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 PURGQ9UJV8 347 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 ANAPC7Q9UJX3 599 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 DKKL1Q9UK85 242 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 MOKQ9UQ07 419 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 RASD1Q9Y272 281 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.97□□□□□ -1.93
VMP1-212ENST00000591782 FBXO7Q9Y3I1 522 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 UGT2A1Q9Y4X1 527 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 PCYT1BQ9Y5K3 369 aaPredicted RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 CHD2O14647 1828 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 SIPA1L1O43166 1804 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 QRICH2Q9H0J4 1663 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 TDRD15B5MCY1 1934 aaKnown RBP2.97□□□□□ -1.93
VMP1-212ENST00000591782 MYH2Q9UKX2 1941 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 RAPGEF6Q8TEU7 1601 aa2.97□□□□□ -1.93
VMP1-212ENST00000591782 CFTRP13569 1480 aa2.96□□□□□ -1.93
VMP1-212ENST00000591782 RGS12O14924 1447 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 PRG4Q92954 1404 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 ZC3H13Q5T200 1668 aaKnown RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 PREX1Q8TCU6 1659 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 MYH7BA7E2Y1 1941 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 TRBV5-5A0A0J9YX44 114 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 A0A1B0GU03 582 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 A0A1W2PR80 420 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 C20orf202A1L168 122 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 RNF212BA8MTL3 300 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 C9J4A7 227 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 SMLR1H3BR10 107 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 K7EP13 123 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 M0R143 59 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 FOXE1O00358 373 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 SLC17A3O00476 420 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 KDELR3O43731 214 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 SSNA1O43805 119 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 DUX1O43812 170 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 FCMRO60667 390 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 ENTPD5O75356 428 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 EIF3GO75821 320 aaKnown RBP eCLIP2.96□□□□□ -1.94
VMP1-212ENST00000591782 PDYNP01213 254 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 C1QBP02746 253 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 VTNP04004 478 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 ATP1B1P05026 303 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 HOXC4P09017 264 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 NBEAP1P0C6P0 100 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 C8orf89P0DMQ9 161 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 SMIM10L1P0DMW3 83 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 RRASP10301 218 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 TUBG1P23258 451 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 F2RP25116 425 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 IVDP26440 423 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 AK4P27144 223 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 HLA-DMAP28067 261 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 FMO3P31513 532 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 EPHX2P34913 555 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 SPRP35270 261 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 GGT2P36268 569 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 RPL4P36578 427 aaKnown RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 HPCAL1P37235 193 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 MMP12P39900 470 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 OPRL1P41146 370 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 ETV6P41212 452 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 KCNJ1P48048 391 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 CCR8P51685 355 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 TMBIM6P55061 237 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 FGF8P55075 233 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 BIDP55957 195 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 KLF3P57682 345 aaPredicted RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 RPS20P60866 119 aaKnown RBP2.96□□□□□ -1.94
VMP1-212ENST00000591782 RBX1P62877 108 aa2.96□□□□□ -1.94
VMP1-212ENST00000591782 EIF5AP63241 154 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms