RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ELOA3Q8NG57 546 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 RASD2Q96D21 266 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF558Q96NG5 402 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 HCFC1R1Q9NWW0 138 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 CGGBP1Q9UFW8 167 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 KLHDC2Q9Y2U9 406 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 FRMPD3Q5JV73 1810 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 A0A1W2PPC1 479 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 H7C1C5 153 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ERCC1P07992 297 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF25P17030 456 aaPredicted RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 PSMB6P28072 239 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 LCN6P62502 163 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 RPP30P78346 268 aaKnown RBP13.75□□□□□ -0.21
CIRBP-228ENST00000590347 LMAN2Q12907 356 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 ALG14Q96F25 216 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 RHBGQ9H310 441 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 CHRNA9Q9UGM1 479 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 SIGLEC7Q9Y286 467 aa13.75□□□□□ -0.21
CIRBP-228ENST00000590347 TSTD3H0UI37 97 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 CTSLP07711 333 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 SLC2A5P22732 501 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 C2orf76Q3KRA6 126 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 C14orf28Q4W4Y0 310 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 CDCP2Q5VXM1 449 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF574Q6ZN55 896 aaPredicted RBP13.74□□□□□ -0.21
CIRBP-228ENST00000590347 PRSS58Q8IYP2 241 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 EID2Q8N6I1 236 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 OR14K1Q8NGZ2 314 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 MR1Q95460 341 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 SLC35A4Q96G79 324 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 RNF126Q9BV68 326 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 TMEM100Q9NV29 134 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 AHSPQ9NZD4 102 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 A6NNC1 897 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 UMAD1C9J7I0 102 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 K7ESM1 405 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 SOD2P04179 222 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 SLC25A4P12235 298 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 NDUFS1P28331 727 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 CDX1P47902 265 aaPredicted RBP13.74□□□□□ -0.21
CIRBP-228ENST00000590347 ADAM8P78325 824 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 UBE3DQ7Z6J8 389 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 GJD3Q8N144 294 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 ACBD4Q8NC06 268 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 ADAMTS15Q8TE58 950 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 DENND4CQ5VZ89 1909 aa13.74□□□□□ -0.21
CIRBP-228ENST00000590347 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 LOC390937A0A1W2PQ73 354 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 OR52A4PA6NMU1 304 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF705GA8MUZ8 300 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 C4orf51C9J302 202 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 OR2C1O95371 312 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 CD53P19397 219 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 OR1Q1Q15612 314 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 IL34Q6ZMJ4 242 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF676Q8N7Q3 588 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 SLC30A7Q8NEW0 376 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 GDF2Q9UK05 429 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF443Q9Y2A4 671 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 RCL1Q9Y2P8 373 aaKnown RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 WDR45Q9Y484 360 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF736B4DX44 427 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 TGM5O43548 720 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 RAMP1O60894 148 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 CYB5AP00167 134 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 F10P00742 488 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 IFNA17P01571 189 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 RNF113BQ8IZP6 322 aaKnown RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 OR2L13Q8N349 312 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 TCTN2Q96GX1 697 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 TPSD1Q9BZJ3 242 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 FLRT3Q9NZU0 649 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 INSL5Q9Y5Q6 135 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 TCF20Q9UGU0 1960 aaKnown RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 MCIDASD6RGH6 385 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 CCL16O15467 120 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 NDUFS4O43181 175 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 CRHP06850 196 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 LRRC69Q6ZNQ3 347 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 RNF44Q7L0R7 432 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF227Q86WZ6 799 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 OR7G2Q8NG99 324 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 FAM46BQ96A09 425 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 SEH1LQ96EE3 360 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 TCEAL2Q9H3H9 227 aaPredicted RBP13.73□□□□□ -0.21
CIRBP-228ENST00000590347 UCK1Q9HA47 277 aa13.73□□□□□ -0.21
CIRBP-228ENST00000590347 MDC1Q14676 2089 aaKnown RBP13.72□□□□□ -0.21
CIRBP-228ENST00000590347 SLC5A10A0PJK1 596 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 DCDC2BA2VCK2 349 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 FCGR3AP08637 254 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF136P52737 540 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 ZNF239Q16600 458 aaKnown RBP13.72□□□□□ -0.21
CIRBP-228ENST00000590347 CHST9Q7L1S5 443 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 GKN2Q86XP6 184 aa13.72□□□□□ -0.21
CIRBP-228ENST00000590347 CMTM8Q8IZV2 173 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms