RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 CLPTM1O96005 669 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 CTLA4P16410 223 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 USF1P22415 310 aaPredicted RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 FPR3P25089 353 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 NOS3P29474 1203 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 SLC6A6P31641 620 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 CDKN2AP42771 156 aaKnown RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 HMGA2P52926 109 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 FXYD6P3P58550 94 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 ERVS71-1P61550 626 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 LOXL1Q08397 574 aaPredicted RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 PPP1R8Q12972 351 aaKnown RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 ENDOGQ14249 297 aaKnown RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 GGTLC2Q14390 218 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 MAD2L1BPQ15013 274 aaPredicted RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 NKPD1Q17RQ9 610 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 FAM98BQ52LJ0 330 aaKnown RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 OTPQ5XKR4 325 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 ZNF774Q6NX45 483 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 C1orf94Q6P1W5 598 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 UNQ6126/PRO20091Q6UXV3 157 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 FOXL2NBQ6ZUU3 175 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 JAZF1Q86VZ6 243 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 FANK1Q8TC84 345 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 UBASH3BQ8TF42 649 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 CCDC124Q96CT7 223 aaKnown RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 POM121L2Q96KW2 1035 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 GPX7Q96SL4 187 aaPredicted RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 NUAK2Q9H093 628 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 WNT5BQ9H1J7 359 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 C1orf21Q9H246 121 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 OR52D1Q9H346 318 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 MYOZ1Q9NP98 299 aaPredicted RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 MYEF2Q9P2K5 600 aaKnown RBP10.38□□□□□ -0.75
TPM4-212ENST00000590180 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
TPM4-212ENST00000590180 NSD1Q96L73 2696 aaPredicted RBP10.37□□□□□ -0.75
TPM4-212ENST00000590180 LYNX1G3V0Z9 82 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 NDUFS8O00217 210 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 GYG2O15488 501 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 CD5LO43866 347 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 MPZL1O95297 269 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 SNAP29O95721 258 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 TXNDC12O95881 172 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 RENP00797 406 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 LYNX1P0DP58 116 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 NAT2P11245 290 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 APEHP13798 732 aaKnown RBP10.37□□□□□ -0.75
TPM4-212ENST00000590180 GCH1P30793 250 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 NR4A2P43354 598 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 GSSP48637 474 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 SCRN3Q0VDG4 424 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 TSPAN31Q12999 210 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 MOGQ16653 247 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 ZNF718Q3SXZ3 478 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 PGBD2Q6P3X8 592 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 LEG1Q6P5S2 330 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 PTCHD4Q6ZW05 846 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.37□□□□□ -0.75
TPM4-212ENST00000590180 SYT9Q86SS6 491 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 ADCK1Q86TW2 530 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 GLB1L2Q8IW92 636 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 LINC00471Q8N535 108 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 ZNF540Q8NDQ6 660 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 OR4K13Q8NH42 304 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 POP5Q969H6 163 aaKnown RBP10.37□□□□□ -0.75
TPM4-212ENST00000590180 NMNAT3Q96T66 252 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 WACQ9BTA9 647 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 TRIM15Q9C019 465 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 MAGIXQ9H6Y5 334 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 REEP1Q9H902 201 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 SLCO1C1Q9NYB5 712 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 VSX1Q9NZR4 365 aaPredicted RBP10.37□□□□□ -0.75
TPM4-212ENST00000590180 LYVE1Q9Y5Y7 322 aa10.37□□□□□ -0.75
TPM4-212ENST00000590180 ARPC3O15145 178 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 SGCEO43556 437 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 UBOX5O94941 541 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 GASTP01350 101 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 IGFBP1P08833 259 aaPredicted RBP10.36□□□□□ -0.75
TPM4-212ENST00000590180 ZNF250P15622 560 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 CRABP1P29762 137 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 ARHGDIAP52565 204 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 KLF3P57682 345 aaPredicted RBP10.36□□□□□ -0.75
TPM4-212ENST00000590180 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 TRAP1Q12931 704 aaKnown RBP10.36□□□□□ -0.75
TPM4-212ENST00000590180 TMEM249Q2WGJ8 235 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 CLEC12AQ5QGZ9 265 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 SPATA46Q5T0L3 261 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 SLC35F1Q5T1Q4 408 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 OR2T5Q6IEZ7 315 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 TMEM154Q6P9G4 183 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 DNM1P34Q6PK57 102 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 ARL9Q6T311 187 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 ZNF786Q8N393 782 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 OR9Q2Q8NGE9 314 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 OR52E2Q8NGJ4 325 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 OR2T29Q8NH02 315 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 ABHD4Q8TB40 342 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 SNX33Q8WV41 574 aa10.36□□□□□ -0.75
TPM4-212ENST00000590180 ASB9Q96DX5 294 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms