RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SPATA46Q5T0L3 261 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 FOXL2NBQ6ZUU3 175 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 NKAIN4Q8IVV8 208 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 KLHL36Q8N4N3 616 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 SIGLECL1Q8N7X8 197 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 OR10A6Q8NH74 314 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 AKR7LQ8NHP1 331 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 ABHD4Q8TB40 342 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 TMEM239Q8WW34 195 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 HDAC2Q92769 488 aaKnown RBP11.82□□□□□ -0.52
VMP1-209ENST00000588915 C4orf45Q96LM5 186 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 OR2H1Q9GZK4 316 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 PATZ1Q9HBE1 687 aaKnown RBP11.82□□□□□ -0.52
VMP1-209ENST00000588915 TMEM106BQ9NUM4 274 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 RIMS3Q9UJD0 308 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 HIF3AQ9Y2N7 669 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 MED31Q9Y3C7 131 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 PPIAL4AQ9Y536 164 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 AUP1Q9Y679 476 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 PKD1L1Q8TDX9 2849 aa11.82□□□□□ -0.52
VMP1-209ENST00000588915 TRRAPQ9Y4A5 3859 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 IGKV1D-43A0A0B4J1Z2 117 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 A8MXK9 166 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 CLDN34H7C241 214 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 KCNAB3O43448 404 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 IGHMP01871 453 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 PPIAL4GP0DN37 164 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 ZNF12P17014 697 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 TNFSF4P23510 183 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 ZFP36P26651 326 aaKnown RBP11.81□□□□□ -0.52
VMP1-209ENST00000588915 LAP3P28838 519 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 SLC6A9P48067 706 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 GZMMP51124 257 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 TAS2R41P59536 307 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 ERVK-25P63136 954 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 TNFAIP6P98066 277 aaPredicted RBP11.81□□□□□ -0.52
VMP1-209ENST00000588915 ZNF154Q13106 437 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 NFYCQ13952 458 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 LAPTM4AQ15012 233 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 ANKDD1AQ495B1 522 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 ALG10Q5BKT4 473 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 ARMCX4Q5H9R4 360 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 FAM205BPQ63HN1 556 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 LRRC28Q86X40 367 aaPredicted RBP11.81□□□□□ -0.52
VMP1-209ENST00000588915 ZNF283Q8N7M2 679 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 NPEPL1Q8NDH3 523 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 MOSPD2Q8NHP6 518 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 PFN4Q8NHR9 129 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 TMEM255BQ8WV15 326 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 SH3GL1Q99961 368 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 WNT5BQ9H1J7 359 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 MMP26Q9NRE1 261 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 MAN2C1Q9NTJ4 1040 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 C20orf141Q9NUB4 165 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 TBCCD1Q9NVR7 557 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 IL19Q9UHD0 177 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 NDRG4Q9ULP0 352 aaKnown RBP11.81□□□□□ -0.52
VMP1-209ENST00000588915 SH3GLB1Q9Y371 365 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 INSIG2Q9Y5U4 225 aa11.81□□□□□ -0.52
VMP1-209ENST00000588915 TANC2Q9HCD6 1990 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 TRAPPC2LH3BP13 241 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 SURF4O15260 269 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 NGFP01138 241 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 SBK2P0C263 348 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 GSTM3P21266 225 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 CRYBA2P53672 197 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 RPL27P61353 136 aaKnown RBP11.8□□□□□ -0.52
VMP1-209ENST00000588915 IL13RA1P78552 427 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 PSG7Q13046 419 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 PIN1Q13526 163 aaPredicted RBP11.8□□□□□ -0.52
VMP1-209ENST00000588915 CYLC2Q14093 348 aaPredicted RBP11.8□□□□□ -0.52
VMP1-209ENST00000588915 RFPL4BQ6ZWI9 263 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 GEMIN6Q8WXD5 167 aaKnown RBP11.8□□□□□ -0.52
VMP1-209ENST00000588915 NSMAFQ92636 917 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 COG8Q96MW5 612 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 NPHS2Q9NP85 383 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 EGFL7Q9UHF1 273 aa11.8□□□□□ -0.52
VMP1-209ENST00000588915 C12orf71A8MTZ7 269 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 F5H0A9 414 aaPredicted RBP11.79□□□□□ -0.52
VMP1-209ENST00000588915 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 TIMM8AO60220 97 aaPredicted RBP11.79□□□□□ -0.52
VMP1-209ENST00000588915 NPPAP01160 153 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 IFNA14P01570 189 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 RNASE1P07998 156 aaKnown RBP11.79□□□□□ -0.52
VMP1-209ENST00000588915 KITLGP21583 273 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 IFNA8P32881 189 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 FMODQ06828 376 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 ST3GAL3Q11203 375 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 BAMBIQ13145 260 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 BEND6Q5SZJ8 279 aaPredicted RBP11.79□□□□□ -0.52
VMP1-209ENST00000588915 NANOGP8Q6NSW7 305 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 SLC25A28Q96A46 364 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 DCLRE1CQ96SD1 692 aaKnown RBP11.79□□□□□ -0.52
VMP1-209ENST00000588915 MRI1Q9BV20 369 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 SLITRK2Q9H156 845 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 MSL2Q9HCI7 577 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 ZNF69Q9UC07 566 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 IL20RAQ9UHF4 553 aa11.79□□□□□ -0.52
VMP1-209ENST00000588915 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms