RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 C5orf49A4QMS7 147 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 H3BSA7 217 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 TXNDC12O95881 172 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 CLPTM1O96005 669 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 ACHEP22303 614 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 IFNGR2P38484 337 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 RPS6KA3P51812 740 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 ERVS71-1P61550 626 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 SCRN3Q0VDG4 424 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 ENDOGQ14249 297 aaKnown RBP12.37□□□□□ -0.43
DDX39A-208ENST00000588692 PCGF3Q3KNV8 242 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 FAM166AQ6J272 317 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 TMEM154Q6P9G4 183 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 SMARCD3Q6STE5 483 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF101Q8IZC7 436 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 ARHGAP24Q8N264 748 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 ICA1LQ8NDH6 482 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 RDH5Q92781 318 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 RASD2Q96D21 266 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 IL1RAPQ9NPH3 570 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 HINT3Q9NQE9 182 aaKnown RBP12.37□□□□□ -0.43
DDX39A-208ENST00000588692 NKIRAS2Q9NYR9 191 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 VSX1Q9NZR4 365 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-208ENST00000588692 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 LPAR3Q9UBY5 353 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 KCNS2Q9ULS6 477 aa12.37□□□□□ -0.43
DDX39A-208ENST00000588692 MALRD1Q5VYJ5 2156 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 IGHV3-13P01766 116 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 HPXP02790 462 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 COX5BP10606 129 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 NAT2P11245 290 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 CTLA4P16410 223 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 FPR3P25089 353 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 MSX2P35548 267 aaPredicted RBP12.36□□□□□ -0.43
DDX39A-208ENST00000588692 WNT5AP41221 380 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 FXYD6P3P58550 94 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF718Q3SXZ3 478 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 MTX3Q5HYI7 312 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 ELFN2Q5R3F8 820 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 ARL9Q6T311 187 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 UGT2A3Q6UWM9 527 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 THSD4Q6ZMP0 1018 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 FANK1Q8TC84 345 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 MSI2Q96DH6 328 aaKnown RBP12.36□□□□□ -0.43
DDX39A-208ENST00000588692 SYT4Q9H2B2 425 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 ACTR3BQ9P1U1 418 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 TMCC3Q9ULS5 477 aa12.36□□□□□ -0.43
DDX39A-208ENST00000588692 LOC100289279A0A1B0GTE1 492 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 KIAA1324LA8MWY0 1029 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-208ENST00000588692 DYNC1I1O14576 645 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 IMPA2O14732 288 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 LMX1BO60663 402 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 LILRA1O75019 489 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 KHDRBS3O75525 346 aaKnown RBP12.35□□□□□ -0.43
DDX39A-208ENST00000588692 FAM107AO95990 144 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 IFNA2P01563 188 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 GCH1P30793 250 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 RRM2P31350 389 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 SLC6A6P31641 620 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 AQP6Q13520 282 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 MBNL2Q5VZF2 373 aaKnown RBP12.35□□□□□ -0.43
DDX39A-208ENST00000588692 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 DNM1P34Q6PK57 102 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 ZER1Q7Z7L7 766 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 ZDHHC21Q8IVQ6 265 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 GLB1L2Q8IW92 636 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 MARS2Q96GW9 593 aaKnown RBP12.35□□□□□ -0.43
DDX39A-208ENST00000588692 GPA33Q99795 319 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 MUC13Q9H3R2 512 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 ELOVL3Q9HB03 270 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 EMC7Q9NPA0 242 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 CGGBP1Q9UFW8 167 aaPredicted RBP12.35□□□□□ -0.43
DDX39A-208ENST00000588692 IL20RAQ9UHF4 553 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 IER3IP1Q9Y5U9 82 aa12.35□□□□□ -0.43
DDX39A-208ENST00000588692 B2RBV5 119 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 LYNX1G3V0Z9 82 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 SOCS2O14508 198 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 ARPC3O15145 178 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 OR10H3O60404 316 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 DOK2O60496 412 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 SLC16A7O60669 478 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 KRT36O76013 467 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 NCR1O76036 304 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 SCG5P05408 212 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 FAM157CP0CG43 387 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 LYNX1P0DP58 116 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 TUBG1P23258 451 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 CRABP1P29762 137 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 GPR6P46095 362 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-208ENST00000588692 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 TMEM33P57088 247 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
DDX39A-208ENST00000588692 RFX4Q33E94 735 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 ALKBH6Q3KRA9 238 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 PGM2L1Q6PCE3 622 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 RFPL4BQ6ZWI9 263 aa12.34□□□□□ -0.43
DDX39A-208ENST00000588692 LINC00471Q8N535 108 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms