RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF12P17014 697 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 LAP3P28838 519 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 LIPAP38571 399 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF154Q13106 437 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 CDK5R2Q13319 367 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 ENDOGQ14249 297 aaKnown RBP15.52■□□□□ 0.08
CCDC43-204ENST00000588687 Q6ZR03 302 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 C1orf174Q8IYL3 243 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 BCL6BQ8N143 479 aaPredicted RBP15.52■□□□□ 0.08
CCDC43-204ENST00000588687 ZNF283Q8N7M2 679 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 TMEM239Q8WW34 195 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 DUX5Q96PT3 197 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 DIRC2Q96SL1 478 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 EGLN1Q9GZT9 426 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 TXNIPQ9H3M7 391 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 POFUT1Q9H488 388 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 RABEP2Q9H5N1 569 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 EIF3KQ9UBQ5 218 aaKnown RBP15.52■□□□□ 0.08
CCDC43-204ENST00000588687 NUP50Q9UKX7 468 aa15.52■□□□□ 0.08
CCDC43-204ENST00000588687 FXYD1O00168 92 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 CST2P09228 141 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 FUT4P22083 530 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 SLC6A9P48067 706 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 CD47Q08722 323 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 PSG7Q13046 419 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 PIN1Q13526 163 aaPredicted RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 FHL1Q13642 323 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 LAPTM4AQ15012 233 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 ZMYND11Q15326 602 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 SGCAQ16586 387 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 TMEM155Q4W5P6 130 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 MTX3Q5HYI7 312 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 BEND6Q5SZJ8 279 aaPredicted RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 INTS11Q5TA45 600 aaKnown RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 ZNF774Q6NX45 483 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 CALHM3Q86XJ0 350 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 LRRC75AQ8NAA5 344 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 ST7LQ8TDW4 575 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 RASSF5Q8WWW0 418 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 ALG12Q9BV10 488 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 POLR2J2Q9GZM3 115 aaKnown RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 POLR2J3Q9H1A7 115 aaKnown RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 KCNN2Q9H2S1 579 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 ZMAT3Q9HA38 289 aaKnown RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 PATZ1Q9HBE1 687 aaKnown RBP15.51■□□□□ 0.07
CCDC43-204ENST00000588687 TMEM106BQ9NUM4 274 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 PLEK2Q9NYT0 353 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 RIMS3Q9UJD0 308 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 SH3GLB1Q9Y371 365 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 INSIG2Q9Y5U4 225 aa15.51■□□□□ 0.07
CCDC43-204ENST00000588687 ANGPT2O15123 496 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 SHOX2O60902 331 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-204ENST00000588687 RNASE1P07998 156 aaKnown RBP15.5■□□□□ 0.07
CCDC43-204ENST00000588687 TNFAIP6P98066 277 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-204ENST00000588687 NFYCQ13952 458 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 ZMAT1Q5H9K5 638 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 ARMCX4Q5H9R4 360 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 AGBL2Q5U5Z8 902 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 UNQ6126/PRO20091Q6UXV3 157 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 TSPEARQ8WU66 669 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 C4orf45Q96LM5 186 aa15.5■□□□□ 0.07
CCDC43-204ENST00000588687 GMNCA6NCL1 334 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 FBP2O00757 339 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 SCG5P05408 212 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 THRBP10828 461 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 NR2C1P13056 603 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 TAS2R41P59536 307 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 BTG1P62324 171 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 PAX2Q02962 417 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 TOP3AQ13472 1001 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-204ENST00000588687 ALG10Q5BKT4 473 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 RABL3Q5HYI8 236 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 SPICQ8N5J4 248 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 SLC26A7Q8TE54 656 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 DACT3Q96B18 629 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-204ENST00000588687 UNKLQ9H9P5 680 aaKnown RBP15.49■□□□□ 0.07
CCDC43-204ENST00000588687 EGFL7Q9UHF1 273 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 TIMM10BQ9Y5J6 103 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 AUP1Q9Y679 476 aa15.49■□□□□ 0.07
CCDC43-204ENST00000588687 CLDN34H7C241 214 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 SBK2P0C263 348 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 KITLGP21583 273 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 RPL27P61353 136 aaKnown RBP15.48■□□□□ 0.07
CCDC43-204ENST00000588687 TAF11Q15544 211 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 NANOGP8Q6NSW7 305 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 IGFN1Q86VF2 1251 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 LRRC28Q86X40 367 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-204ENST00000588687 TREML1Q86YW5 311 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 TAF15Q92804 592 aaKnown RBP eCLIP15.48■□□□□ 0.07
CCDC43-204ENST00000588687 SAMD8Q96LT4 415 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 DCLRE1CQ96SD1 692 aaKnown RBP15.48■□□□□ 0.07
CCDC43-204ENST00000588687 POLE4Q9NR33 117 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 MED31Q9Y3C7 131 aa15.48■□□□□ 0.07
CCDC43-204ENST00000588687 TIMM8AO60220 97 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-204ENST00000588687 OR1E2P47887 323 aa15.47■□□□□ 0.07
CCDC43-204ENST00000588687 ERFP50548 548 aa15.47■□□□□ 0.07
CCDC43-204ENST00000588687 PAX8Q06710 450 aa15.47■□□□□ 0.07
CCDC43-204ENST00000588687 PDLIM3Q53GG5 364 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-204ENST00000588687 RBMS3Q6XE24 437 aaKnown RBP15.47■□□□□ 0.07
CCDC43-204ENST00000588687 C9orf139Q6ZV77 190 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms