RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 OR52N5Q8NH56 324 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 TRMT61AQ96FX7 289 aaKnown RBP22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 CENPOQ9BU64 300 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 RBM24Q9BX46 236 aaKnown RBP22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 LINC00470Q9BZP3 86 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 SLCO5A1Q9H2Y9 848 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 NELFAQ9H3P2 528 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 PTTG2Q9NZH5 202 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 IKZF2Q9UKS7 526 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 STUB1Q9UNE7 303 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 OGG1O15527 345 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 TGFBR1P36897 503 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 NFATC3Q12968 1075 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 CD200R1LQ6Q8B3 271 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 CORO6Q6QEF8 472 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 LRRN1Q6UXK5 716 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 ZNF679Q8IYX0 411 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 ALDH16A1Q8IZ83 802 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 CPT1CQ8TCG5 803 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 RPS4Y2Q8TD47 263 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 TMEM203Q969S6 136 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 TM9SF2Q99805 663 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 SVILO95425 2214 aa22.96■■□□□ 1.27
SCAMP4-210ENST00000588555 LOC100506127A0A0U1RQW1 187 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 TMCC2O75069 709 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 TACSTD2P09758 323 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 AGTR1P30556 359 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 PSMB10P40306 273 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 ZNF84P51523 738 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 CDK5R1Q15078 307 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 CCDC58Q4VC31 144 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 KCTD18Q6PI47 426 aaPredicted RBP22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 NUFIP2Q7Z417 695 aaKnown RBP22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 FAM220AQ7Z4H9 259 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 MED12LQ86YW9 2145 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 MAP6Q96JE9 813 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 PGLYRP3Q96LB9 341 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 TRIB1Q96RU8 372 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 CDADC1Q9BWV3 514 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 B3GAT2Q9NPZ5 323 aa22.95■■□□□ 1.26
SCAMP4-210ENST00000588555 MSR1P21757 451 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 TGM4P49221 684 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 LSM6P62312 80 aaKnown RBP22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 MRPS34P82930 218 aaKnown RBP22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 ACSF3Q4G176 576 aaPredicted RBP22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 KRTCAP3Q53RY4 240 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 GDPGP1Q6ZNW5 385 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 YIPF7Q8N8F6 280 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 NDNFQ8TB73 568 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 RNF167Q9H6Y7 350 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 GPR35Q9HC97 309 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 SLC7A10Q9NS82 523 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 FREM1Q5H8C1 2179 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 AHRRA9YTQ3 701 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 RPL22L1Q6P5R6 122 aaKnown RBP22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 ARL9Q6T311 187 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 RNF133Q8WVZ7 376 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 SMIM19Q96E16 107 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 GMPPAQ96IJ6 420 aaPredicted RBP22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 ZNF416Q9BWM5 594 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 ELOVL3Q9HB03 270 aa22.94■■□□□ 1.26
SCAMP4-210ENST00000588555 OR6C65A6NJZ3 312 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 HSPB2A8KAH6 182 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 SS18L1O75177 396 aaPredicted RBP22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 CD53P19397 219 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 TDGF1P3P51864 188 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 NANOS3P60323 173 aaKnown RBP22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 ENDOGQ14249 297 aaKnown RBP22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 HSPB2Q16082 182 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 SGCAQ16586 387 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 P4HA3Q7Z4N8 544 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 OR10S1Q8NGN2 331 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 HSD17B8Q92506 261 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 DCLRE1CQ96SD1 692 aaKnown RBP22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 DCUN1D5Q9BTE7 237 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 TMED9Q9BVK6 235 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 MROQ9BYG7 248 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 ASH2LQ9UBL3 628 aa22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 GDF2Q9UK05 429 aaPredicted RBP22.93■■□□□ 1.26
SCAMP4-210ENST00000588555 GTF3C1Q12789 2109 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 TMEM8BA6NDV4 472 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 IGHV3-9P01782 118 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 GUCA1AP43080 201 aaPredicted RBP22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 FABP5Q01469 135 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 ROR2Q01974 943 aaKnown RBP22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 MRPL28Q13084 256 aaKnown RBP22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 GUSBP1Q15486 140 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 CEACAM16Q2WEN9 425 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 CFAP77Q6ZQR2 320 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 SPATC1Q76KD6 591 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 CISD2Q8N5K1 135 aaKnown RBP22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 HAVCR2Q8TDQ0 301 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 APH1AQ96BI3 265 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 PRORYQ9H606 182 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 GLRX2Q9NS18 164 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 TMEM38BQ9NVV0 291 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 POLR1DQ9Y2S0 133 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 LRP12Q9Y561 859 aa22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 NCOA6Q14686 2063 aaPredicted RBP22.92■■□□□ 1.26
SCAMP4-210ENST00000588555 RPL36A-HNRNPH2H7BZ11 118 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms