RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ABHD6Q9BV23 337 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 ZNF416Q9BWM5 594 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 NELFAQ9H3P2 528 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 CYB5R1Q9UHQ9 305 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 LAMP5Q9UJQ1 280 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 CAB39Q9Y376 341 aaPredicted RBP9.94□□□□□ -0.82
VMP1-207ENST00000588131 LHFPL6Q9Y693 200 aa9.94□□□□□ -0.82
VMP1-207ENST00000588131 MAP1BP46821 2468 aaKnown RBP9.93□□□□□ -0.82
VMP1-207ENST00000588131 J3QLW9 94 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ATXN7O15265 892 aaPredicted RBP9.93□□□□□ -0.82
VMP1-207ENST00000588131 CGAP01215 116 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 IL2RAP01589 272 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ITGA5P08648 1049 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 HSMCR30P0CW71 290 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 OR8G3PP0DMU2 310 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ZNF19P17023 458 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 LSM6P62312 80 aaKnown RBP9.93□□□□□ -0.82
VMP1-207ENST00000588131 STK11Q15831 433 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 TIGD6Q17RP2 521 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 FAM27BQ5VT28 67 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 SLC18B1Q6NT16 456 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 KLHL24Q6TFL4 600 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 CFAP77Q6ZQR2 320 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 SPATC1Q76KD6 591 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 DCXRQ7Z4W1 244 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ATCAYQ86WG3 371 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 KLBQ86Z14 1044 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 LRRC18Q8N456 261 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ZNF454Q8N9F8 522 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 OR13F1Q8NGS4 319 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ST7LQ8TDW4 575 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 SNX33Q8WV41 574 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 FBXO17Q96EF6 278 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 MAP6Q96JE9 813 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 COG8Q96MW5 612 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 OPALINQ96PE5 141 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 MGLLQ99685 303 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 SH3GL3Q99963 347 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 CDADC1Q9BWV3 514 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 OPN3Q9H1Y3 402 aaPredicted RBP9.93□□□□□ -0.82
VMP1-207ENST00000588131 PLSCR4Q9NRQ2 329 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 SLCO1C1Q9NYB5 712 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 ASH2LQ9UBL3 628 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 MALT1Q9UDY8 824 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 MRM2Q9UI43 246 aaKnown RBP9.93□□□□□ -0.82
VMP1-207ENST00000588131 GDF2Q9UK05 429 aaPredicted RBP9.93□□□□□ -0.82
VMP1-207ENST00000588131 POLR1DQ9Y2S0 133 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 GRIP1Q9Y3R0 1128 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 TMEM14AQ9Y6G1 99 aa9.93□□□□□ -0.82
VMP1-207ENST00000588131 SHANK1Q9Y566 2161 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 TRGV8A0A0C4DH27 118 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 A0A0G2JNJ9 132 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 A6NHS1 94 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 E9PI62 339 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 PHYHO14832 338 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ABHD16AO95870 558 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 IL18BPO95998 194 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 MT-ND5P03915 603 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 CRHP06850 196 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 NPR2P20594 1047 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 IGHV1-2P23083 117 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 MPGP29372 298 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 TGFBR2P37173 567 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 LIPAP38571 399 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 GUCA1AP43080 201 aaPredicted RBP9.92□□□□□ -0.82
VMP1-207ENST00000588131 GTF2A1P52655 376 aaPredicted RBP9.92□□□□□ -0.82
VMP1-207ENST00000588131 ACTA2P62736 377 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ACTG2P63267 376 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 EGR3Q06889 387 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 PMPCAQ10713 525 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 TSTQ16762 297 aaKnown RBP9.92□□□□□ -0.82
VMP1-207ENST00000588131 ARMCX4Q5H9R4 360 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 LRRN1Q6UXK5 716 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 TMPRSS11AQ6ZMR5 421 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ZNF813Q6ZN06 617 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 PLEKHG7Q6ZR37 379 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 VASH1Q7L8A9 365 aaPredicted RBP9.92□□□□□ -0.82
VMP1-207ENST00000588131 GPR141Q7Z602 305 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 SKA3Q8IX90 412 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 SYS1Q8N2H4 156 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 SLC22A24Q8N4F4 322 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ZFP41Q8N8Y5 198 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ZNF610Q8N9Z0 462 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 OR10S1Q8NGN2 331 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 OR52N5Q8NH56 324 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 FGFBP3Q8TAT2 258 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ZFP3Q96NJ6 502 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 OR8B4Q96RC9 309 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 SIAEQ9HAT2 523 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 ACOXLQ9NUZ1 547 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 Q9UFV3 132 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 GNG8Q9UK08 70 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 IKZF2Q9UKS7 526 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 PROCRQ9UNN8 238 aa9.92□□□□□ -0.82
VMP1-207ENST00000588131 SIRT4Q9Y6E7 314 aaPredicted RBP9.92□□□□□ -0.82
VMP1-207ENST00000588131 PHF3Q92576 2039 aaKnown RBP9.92□□□□□ -0.82
VMP1-207ENST00000588131 ZZEF1O43149 2961 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 PIEZO2Q9H5I5 2752 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 A0A096LPE4 126 aa9.91□□□□□ -0.82
VMP1-207ENST00000588131 A0A1W2PPZ6 126 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms