RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PURGQ9UJV8 347 aaKnown RBP12.21□□□□□ -0.45
SDF2-202ENST00000585428 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 TIMM10BQ9Y5J6 103 aa12.21□□□□□ -0.45
SDF2-202ENST00000585428 MGAM2Q2M2H8 2515 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 TRRAPQ9Y4A5 3859 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 ISPDA4D126 451 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 CST2P09228 141 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 LAP3P28838 519 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 PSG7Q13046 419 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 HNRNPA0Q13151 305 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 PIN1Q13526 163 aaPredicted RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 VMACQ2NL98 169 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 INTS11Q5TA45 600 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 RBMS3Q6XE24 437 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 FOXL2NBQ6ZUU3 175 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 RFPL4BQ6ZWI9 263 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 ZNF771Q7L3S4 317 aaPredicted RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 ALDH16A1Q8IZ83 802 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 BCL6BQ8N143 479 aaPredicted RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 ZNF283Q8N7M2 679 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 ABHD4Q8TB40 342 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 LRRC8CQ8TDW0 803 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 GEMIN6Q8WXD5 167 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 STON2Q8WXE9 905 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 SAMD8Q96LT4 415 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 RBP7Q96R05 134 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 GPA33Q99795 319 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 POLR2J2Q9GZM3 115 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 PATZ1Q9HBE1 687 aaKnown RBP12.2□□□□□ -0.46
SDF2-202ENST00000585428 TMEM106BQ9NUM4 274 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 AUP1Q9Y679 476 aa12.2□□□□□ -0.46
SDF2-202ENST00000585428 OR5F1O95221 314 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 IGHMP01871 453 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 ZNF12P17014 697 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 TUBG1P23258 451 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 TNFAIP6P98066 277 aaPredicted RBP12.19□□□□□ -0.46
SDF2-202ENST00000585428 PAX8Q06710 450 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 TAF11Q15544 211 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 TMEM155Q4W5P6 130 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 MTX3Q5HYI7 312 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 BEND6Q5SZJ8 279 aaPredicted RBP12.19□□□□□ -0.46
SDF2-202ENST00000585428 NANOGP8Q6NSW7 305 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 SYT9Q86SS6 491 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 ZNF48Q96MX3 618 aaPredicted RBP12.19□□□□□ -0.46
SDF2-202ENST00000585428 DCLRE1CQ96SD1 692 aaKnown RBP12.19□□□□□ -0.46
SDF2-202ENST00000585428 ALG12Q9BV10 488 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 ELOVL3Q9HB03 270 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 TUBG2Q9NRH3 451 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 HIF3AQ9Y2N7 669 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
SDF2-202ENST00000585428 GMNCA6NCL1 334 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 DNAJC9-AS1A6NH13 148 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 POM121CA8CG34 1229 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ANGPT2O15123 496 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 SCG5P05408 212 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 VIMP08670 466 aaKnown RBP12.18□□□□□ -0.46
SDF2-202ENST00000585428 THRBP10828 461 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 NR2C1P13056 603 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ARHGDIAP52565 204 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 TAS2R41P59536 307 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 RPL27P61353 136 aaKnown RBP12.18□□□□□ -0.46
SDF2-202ENST00000585428 PCBD1P61457 104 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 CD47Q08722 323 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 FHL1Q13642 323 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 NFYCQ13952 458 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ENDOGQ14249 297 aaKnown RBP12.18□□□□□ -0.46
SDF2-202ENST00000585428 ZMAT1Q5H9K5 638 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 AGBL2Q5U5Z8 902 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ZNF774Q6NX45 483 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 Q6ZR03 302 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ZER1Q7Z7L7 766 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 CALHM3Q86XJ0 350 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 KLHL36Q8N4N3 616 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 CLDN22Q8N7P3 220 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 FNDC8Q8TC99 324 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 DUX5Q96PT3 197 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ZMAT3Q9HA38 289 aaKnown RBP12.18□□□□□ -0.46
SDF2-202ENST00000585428 TBCCD1Q9NVR7 557 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 BAG5Q9UL15 447 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 MED31Q9Y3C7 131 aa12.18□□□□□ -0.46
SDF2-202ENST00000585428 ARHGAP32A7KAX9 2087 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 HTR3EA5X5Y0 456 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 A8MXK9 166 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 F5H0A9 414 aaPredicted RBP12.17□□□□□ -0.46
SDF2-202ENST00000585428 CLDN34H7C241 214 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 FBP2O00757 339 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 SHOX2O60902 331 aaPredicted RBP12.17□□□□□ -0.46
SDF2-202ENST00000585428 RNASE1P07998 156 aaKnown RBP12.17□□□□□ -0.46
SDF2-202ENST00000585428 COX5BP10606 129 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 KITLGP21583 273 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 OR1E2P47887 323 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 SEC61A1P61619 476 aaKnown RBP12.17□□□□□ -0.46
SDF2-202ENST00000585428 PAX2Q02962 417 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 BAMBIQ13145 260 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 ZMYND11Q15326 602 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 ALG10Q5BKT4 473 aa12.17□□□□□ -0.46
SDF2-202ENST00000585428 ARMCX4Q5H9R4 360 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms