RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZNF101Q8IZC7 436 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 FAM156AQ8NDB6 213 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 CPEB3Q8NE35 698 aaKnown RBP15.19■□□□□ 0.02
TOP3A-220ENST00000585031 OR1J1Q8NGS3 322 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 OR4F5Q8NH21 305 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 PYDC1Q8WXC3 89 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 UBE2FQ969M7 185 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 MARS2Q96GW9 593 aaKnown RBP15.19■□□□□ 0.02
TOP3A-220ENST00000585031 PAIP1Q9H074 479 aaKnown RBP15.19■□□□□ 0.02
TOP3A-220ENST00000585031 VCX3BQ9H321 246 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 C12orf10Q9HB07 376 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 GLTPQ9NZD2 209 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 ACTR3BQ9P1U1 418 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 KLHL21Q9UJP4 597 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 ZNF232Q9UNY5 417 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 SNX13Q9Y5W8 968 aa15.19■□□□□ 0.02
TOP3A-220ENST00000585031 AQP12BA6NM10 295 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 A8MXK9 166 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 EVPLLA8MZ36 301 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 PRB2P02812 416 aaPredicted RBP15.18■□□□□ 0.02
TOP3A-220ENST00000585031 NUDT7P0C024 238 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 PPIBP23284 216 aaKnown RBP15.18■□□□□ 0.02
TOP3A-220ENST00000585031 MSX2P35548 267 aaPredicted RBP15.18■□□□□ 0.02
TOP3A-220ENST00000585031 VHLP40337 213 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 ANXA11P50995 505 aaKnown RBP15.18■□□□□ 0.02
TOP3A-220ENST00000585031 CRISP3P54108 245 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 GTDC1Q4AE62 458 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 RUNDC3AQ59EK9 446 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 LCN8Q6JVE9 175 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 AQP12AQ8IXF9 295 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 TRIML2Q8N7C3 387 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 LSMEM1Q8N8F7 131 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 OR4K5Q8NGD3 323 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 WFDC6Q9BQY6 131 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 MRI1Q9BV20 369 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 BCL2L14Q9BZR8 327 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 PCDHAC1Q9H158 963 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 PRDM13Q9H4Q3 707 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 RNF121Q9H920 327 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 SLAMF8Q9P0V8 285 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 MAGEL2Q9UJ55 1249 aa15.18■□□□□ 0.02
TOP3A-220ENST00000585031 COL7A1Q02388 2944 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 A0A0G2JPF8 293 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 CLPSL1A2RUU4 121 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 HNRNPCL2B2RXH8 293 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 HNRNPCL3B7ZW38 293 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 NDUFA7O95182 113 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 NGFP01138 241 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 ADH4P08319 380 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 MMP7P09237 267 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-220ENST00000585031 HNRNPCL4P0DMR1 293 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 CRATP43155 626 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 ERFP50548 548 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 MTPNP58546 118 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 DSTNP60981 165 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 ZMYND11Q15326 602 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 TBC1D28Q2M2D7 210 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 FIP1L1Q6UN15 594 aaKnown RBP15.17■□□□□ 0.02
TOP3A-220ENST00000585031 PXKQ7Z7A4 578 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 LRRC28Q86X40 367 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-220ENST00000585031 SCAIQ8N9R8 606 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 CPPED1Q9BRF8 314 aaPredicted RBP15.17■□□□□ 0.02
TOP3A-220ENST00000585031 CHIAQ9BZP6 476 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 MARCH7Q9H992 704 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 MRPL39Q9NYK5 338 aaKnown RBP15.17■□□□□ 0.02
TOP3A-220ENST00000585031 CALML5Q9NZT1 146 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 VAPAQ9P0L0 249 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 RPS6KB2Q9UBS0 482 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 CORO2BQ9UQ03 480 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 PLXNB1O43157 2135 aa15.17■□□□□ 0.02
TOP3A-220ENST00000585031 TRBV5-3A0A0A0MS03 114 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 SLC22A31A6NKX4 558 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 C11orf98E9PRG8 122 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 ARPC2O15144 300 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 GSTA4O15217 222 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 TPST2O60704 377 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 KRT75O95678 551 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 ZCCHC18P0CG32 403 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 AHCYP23526 432 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 SLC3A1Q07837 685 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 HLXQ14774 488 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-220ENST00000585031 TAF9Q16594 264 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 MOGQ16653 247 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 BEAN1Q3B7T3 259 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 MTX3Q5HYI7 312 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 ALG10BQ5I7T1 473 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 TMEM53Q6P2H8 277 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 C5orf46Q6UWT4 87 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 BRD3OSQ6XYD6 125 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 OR6S1Q8NH40 331 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 MAL2Q969L2 176 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 DACT3Q96B18 629 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-220ENST00000585031 UPRTQ96BW1 309 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 DUS3LQ96G46 650 aaKnown RBP15.16■□□□□ 0.02
TOP3A-220ENST00000585031 SIGLEC11Q96RL6 698 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 DIRC2Q96SL1 478 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 MSL2Q9HCI7 577 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 IFT52Q9Y366 437 aa15.16■□□□□ 0.02
TOP3A-220ENST00000585031 LOC100509620A0A075B734 347 aa15.15■□□□□ 0.02
TOP3A-220ENST00000585031 TRAV40A0A0B4J280 105 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms