RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SYT4	Q9H2B2	425 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR51B6	Q9H340	312 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR52D1	Q9H346	318 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	MAGIX	Q9H6Y5	334 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	EMC7	Q9NPA0	242 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	TAS2R1	Q9NYW7	299 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	IER3IP1	Q9Y5U9	82 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	LYVE1	Q9Y5Y7	322 aa		11.42	□□□□□ -0.58
SREBF1-223	ENST00000584760	CUBN	O60494	3623 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	1e-8	■■■■□ 22.6
SREBF1-223	ENST00000584760	IGLV3-9	A0A075B6K5	115 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	LOC100509620	A0A075B734	347 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	LOC390937	A0A1W2PQ73	354 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	ICMT	O60725	284 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	KRT36	O76013	467 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	PPP1R3D	O95685	299 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	ADRA2A	P08913	450 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZNF250	P15622	560 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	IFNGR2	P38484	337 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	WNT5A	P41221	380 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	NR4A2	P43354	598 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	RPS6KA3	P51812	740 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	UCP2	P55851	309 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	PCBD1	P61457	104 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	SRSF2	Q01130	221 aa	Known RBP	11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	TMEM249	Q2WGJ8	235 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	RFX4	Q33E94	735 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	UGT2A3	Q6UWM9	527 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZNF620	Q6ZNG0	422 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	TRPM8	Q7Z2W7	1104 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	SYT9	Q86SS6	491 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	DHFR2	Q86XF0	187 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZNF101	Q8IZC7	436 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR4C15	Q8NGM1	316 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	BCAS4	Q8TDM0	211 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	NEU4	Q8WWR8	484 aa	Predicted RBP	11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	CCDC124	Q96CT7	223 aa	Known RBP	11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	ASB9	Q96DX5	294 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	CLPTM1L	Q96KA5	538 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	BTBD10	Q9BSF8	475 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	PIMREG	Q9BSJ6	248 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	C19orf24	Q9BVV8	132 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	BCL2L14	Q9BZR8	327 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	LRMDA	Q9H2I8	198 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	TPK1	Q9H3S4	243 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	TMCC3	Q9ULS5	477 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	MALRD1	Q5VYJ5	2156 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	TANC2	Q9HCD6	1990 aa		11.41	□□□□□ -0.58
SREBF1-223	ENST00000584760	C12orf71	A8MTZ7	269 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	ARPC3	O15145	178 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	SLC16A7	O60669	478 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	CLPTM1	O96005	669 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	ERCC1	P07992	297 aa	Predicted RBP	11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	DAO	P14920	347 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	USF1	P22415	310 aa	Predicted RBP	11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	SLC6A6	P31641	620 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	CDKN2A	P42771	156 aa	Known RBP	11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	GUCA1A	P43080	201 aa	Predicted RBP	11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	RAD52	P43351	418 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	ALDH3B1	P43353	468 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	TSPAN31	Q12999	210 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	ZNF774	Q6NX45	483 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	RFPL4B	Q6ZWI9	263 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	GLB1L2	Q8IW92	636 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	OR9Q2	Q8NGE9	314 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	FOXN4	Q96NZ1	517 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	ERMAP	Q96PL5	475 aa	Predicted RBP	11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	WAC	Q9BTA9	647 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	VNN3	Q9NY84	501 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	REV1	Q9UBZ9	1251 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	DUSP13	Q9UII6	198 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760	TIMM10B	Q9Y5J6	103 aa		11.4	□□□□□ -0.58
SREBF1-223	ENST00000584760		A0A1W2PPW3	197 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	C5orf49	A4QMS7	147 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	TNFRSF11B	O00300	401 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	DCTN6	O00399	190 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	ACOT8	O14734	319 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	KHDRBS3	O75525	346 aa	Known RBP	11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	UBOX5	O94941	541 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	LCK	P06239	509 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	GAA	P10253	952 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	CCNO	P22674	350 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	GIF	P27352	417 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	GDI2	P50395	445 aa	Known RBP	11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	KLF3	P57682	345 aa	Predicted RBP	11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	SCRN3	Q0VDG4	424 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	AQP6	Q13520	282 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	TMEM255A	Q5JRV8	349 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	OTP	Q5XKR4	325 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	ZNF786	Q8N393	782 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	OR1J1	Q8NGS3	322 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	SYNPR	Q8TBG9	265 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	GNPDA2	Q8TDQ7	276 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	SAMD8	Q96LT4	415 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	TSSK2	Q96PF2	358 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	SNX18	Q96RF0	628 aa		11.39	□□□□□ -0.59
SREBF1-223	ENST00000584760	TRIM15	Q9C019	465 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms