RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 UBL3O95164 117 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 WNT11O96014 354 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 SCG5P05408 212 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 SBK2P0C263 348 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 PPP3CBP16298 524 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 ENDOGQ14249 297 aaKnown RBP16.03■□□□□ 0.16
RFFL-211ENST00000584541 TEX30Q5JUR7 227 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 TIMM23BQ5SRD1 257 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 TMEM53Q6P2H8 277 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 UGT2A3Q6UWM9 527 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 SSX8Q7RTT4 187 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 SYT9Q86SS6 491 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 TIGD4Q8IY51 512 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 ZNF786Q8N393 782 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 SSC4DQ8WTU2 575 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 S100PBPQ96BU1 408 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 MUCL1Q96DR8 90 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 YIPF3Q9GZM5 350 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 ADGRL4Q9HBW9 690 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 BLOC1S6Q9UL45 172 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 LRCH1Q9Y2L9 728 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 TPRKBQ9Y3C4 175 aa16.03■□□□□ 0.16
RFFL-211ENST00000584541 ARPC4-TTLL3A0A0A6YYG9 625 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 EFCAB10A6NFE3 127 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 WIPF3A6NGB9 483 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 SLC1A7O00341 560 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 CCDC159P0C7I6 412 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 CD79AP11912 226 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 PAX7P23759 505 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 ARR3P36575 388 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 SORDQ00796 357 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 SCRN3Q0VDG4 424 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 RAB40BQ12829 278 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 RBM48Q5RL73 367 aaKnown RBP16.02■□□□□ 0.16
RFFL-211ENST00000584541 OTPQ5XKR4 325 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 LAIR2Q6ISS4 152 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 MNTQ99583 582 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 MOV10Q9HCE1 1003 aaKnown RBP16.02■□□□□ 0.16
RFFL-211ENST00000584541 UBAP1Q9NZ09 502 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 ASH2LQ9UBL3 628 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 TMEM14AQ9Y6G1 99 aa16.02■□□□□ 0.16
RFFL-211ENST00000584541 CACNA1CQ13936 2221 aa16.02■□□□□ 0.15
RFFL-211ENST00000584541 GCN1Q92616 2671 aaKnown RBP16.02■□□□□ 0.15
RFFL-211ENST00000584541 XPNPEP2O43895 674 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 FADS2O95864 444 aaKnown RBP16.01■□□□□ 0.15
RFFL-211ENST00000584541 PEX19P40855 299 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 ACTC1P68032 377 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 ACTA1P68133 377 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 TFF3Q07654 80 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 GSG1Q2KHT4 349 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 DPY19L4Q7Z388 723 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 LINC00346Q8IVM7 164 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 SLC35F2Q8IXU6 374 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 ZNF454Q8N9F8 522 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 ZNF540Q8NDQ6 660 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 GJC3Q8NFK1 279 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 OR52N5Q8NH56 324 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 HSD17B8Q92506 261 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 LGALS12Q96DT0 336 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 FBXO17Q96EF6 278 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 MRPS18AQ9NVS2 196 aaKnown RBP16.01■□□□□ 0.15
RFFL-211ENST00000584541 CNOT2Q9NZN8 540 aaKnown RBP16.01■□□□□ 0.15
RFFL-211ENST00000584541 NDRG3Q9UGV2 375 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 CYB5R1Q9UHQ9 305 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 LAMP5Q9UJQ1 280 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 EXOGQ9Y2C4 368 aaKnown RBP16.01■□□□□ 0.15
RFFL-211ENST00000584541 TIMM10BQ9Y5J6 103 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 LHFPL6Q9Y693 200 aa16.01■□□□□ 0.15
RFFL-211ENST00000584541 ASH1LQ9NR48 2969 aaKnown RBP16.01■□□□□ 0.15
RFFL-211ENST00000584541 ZNF670-ZNF695F2Z2N8 137 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PHYHO14832 338 aa16■□□□□ 0.15
RFFL-211ENST00000584541 APOL3O95236 402 aa16■□□□□ 0.15
RFFL-211ENST00000584541 RAB36O95755 333 aa16■□□□□ 0.15
RFFL-211ENST00000584541 HLA-HP01893 362 aa16■□□□□ 0.15
RFFL-211ENST00000584541 OR2T7P0C7T2 308 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PIPP12273 146 aaPredicted RBP16■□□□□ 0.15
RFFL-211ENST00000584541 ZNF32P17041 273 aa16■□□□□ 0.15
RFFL-211ENST00000584541 CCKARP32238 428 aa16■□□□□ 0.15
RFFL-211ENST00000584541 RAB1AP62820 205 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PLP2Q04941 152 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PIGFQ07326 219 aa16■□□□□ 0.15
RFFL-211ENST00000584541 EIF2B1Q14232 305 aaKnown RBP16■□□□□ 0.15
RFFL-211ENST00000584541 PPA1Q15181 289 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PCK2Q16822 640 aa16■□□□□ 0.15
RFFL-211ENST00000584541 SLC18B1Q6NT16 456 aa16■□□□□ 0.15
RFFL-211ENST00000584541 CDC20BQ86Y33 519 aa16■□□□□ 0.15
RFFL-211ENST00000584541 WDR31Q8NA23 367 aa16■□□□□ 0.15
RFFL-211ENST00000584541 OR10H4Q8NGA5 316 aa16■□□□□ 0.15
RFFL-211ENST00000584541 OR4F15Q8NGB8 312 aa16■□□□□ 0.15
RFFL-211ENST00000584541 OR2T27Q8NH04 317 aa16■□□□□ 0.15
RFFL-211ENST00000584541 OTOSQ8NHW6 89 aa16■□□□□ 0.15
RFFL-211ENST00000584541 MYCBPQ99417 103 aaPredicted RBP16■□□□□ 0.15
RFFL-211ENST00000584541 YTHDF1Q9BYJ9 559 aaKnown RBP16■□□□□ 0.15
RFFL-211ENST00000584541 C1orf198Q9H425 327 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PSORS1C1Q9UIG5 152 aa16■□□□□ 0.15
RFFL-211ENST00000584541 FBXL3Q9UKT7 428 aa16■□□□□ 0.15
RFFL-211ENST00000584541 PCDHGB5Q9Y5G0 923 aa16■□□□□ 0.15
RFFL-211ENST00000584541 HELZ2Q9BYK8 2649 aaKnown RBP16■□□□□ 0.15
RFFL-211ENST00000584541 A0A1W2PR80 420 aa15.99■□□□□ 0.15
RFFL-211ENST00000584541 LYNP07948 512 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms