RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 C5orf63A6NC05 138 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 BTBD17A6NE02 478 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 H0YJW9 148 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 DYNC1I1O14576 645 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 POLR1CO15160 346 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 SOCS1O15524 211 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 ATP1B2P14415 290 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CCNB1P14635 433 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 DCKP27707 260 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CASP14P31944 242 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 SSR1P43307 286 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 MXD1Q05195 221 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 TWF1Q12792 350 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CDH17Q12864 832 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CCDC92Q53HC0 331 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 SLC16A13Q7RTY0 426 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 H2BFWTQ7Z2G1 175 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CDKL3Q8IVW4 592 aaPredicted RBP1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 EID2Q8N6I1 236 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 METTL13Q8N6R0 699 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 ST20-AS1Q8NBB2 130 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 SDR9C7Q8NEX9 313 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 STEAP2Q8NFT2 490 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 OR4F6Q8NGB9 312 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 OR6N1Q8NGY5 312 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 RHEBL1Q8TAI7 183 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CXorf40AQ8TE69 158 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 ZCCHC13Q8WW36 166 aaKnown RBP1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 SHC3Q92529 594 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 NTAN1Q96AB6 310 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CWH43Q9H720 699 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 ENOPH1Q9UHY7 261 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 ADGRL1O94910 1474 aa1.37□□□□□ -2.19
SMCHD1-206ENST00000581631 CNTNAP1P78357 1384 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 CAMTA1Q9Y6Y1 1673 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF816-ZNF321PA0A0X1KG74 233 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 DNASE2O00115 360 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 MRPS12O15235 138 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 TMEM50AO95807 157 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 GUCA1CO95843 209 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 OR8U9P0C7N5 309 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 OR5H8P0DN80 308 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 ETS2P15036 469 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 IL1RNP18510 177 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 CEACAM3P40198 252 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 GDI2P50395 445 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 PRMT2P55345 433 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 GPX6P59796 221 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 SEC61GP60059 68 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 UBE2NP61088 152 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 FLI1Q01543 452 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 GK3PQ14409 553 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 IMMTQ16891 758 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 PMF1Q6P1K2 205 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 SPINT4Q6UDR6 99 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 EFL1Q7Z2Z2 1120 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 SNX20Q7Z614 316 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 PDIK1LQ8N165 341 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 TMEM105Q8N8V8 129 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 ZFP41Q8N8Y5 198 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 TMEM104Q8NE00 496 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 MRGPRFQ96AM1 343 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 CNDP1Q96KN2 507 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 SERPINB12Q96P63 405 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 C1orf198Q9H425 327 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 CLEC4AQ9UMR7 237 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 ING4Q9UNL4 249 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 HYOU1Q9Y4L1 999 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 MMACHCQ9Y4U1 282 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 DDX49Q9Y6V7 483 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 DOCK8Q8NF50 2099 aa1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 AHDC1Q5TGY3 1603 aaPredicted RBP1.36□□□□□ -2.19
SMCHD1-206ENST00000581631 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 IGHV3OR16-8A0A075B7F1 116 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 CENPVL3A0A0U1RRI6 287 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 ZNF98A6NK75 572 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 PCP4L1A6NKN8 68 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 MTX2O75431 263 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 YWHAGP61981 247 aaKnown RBP eCLIP1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 RCAN2Q14206 197 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 ANKRD26P1Q6NSI1 321 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 LRRC75A-AS1Q8N1F1 130 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 TMEM256Q8N2U0 113 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 GPATCH11Q8N954 259 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 PTX4Q96A99 478 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 TBC1D31Q96DN5 1066 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 SEH1LQ96EE3 360 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 TVP23CQ96ET8 276 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 DHX35Q9H5Z1 703 aaKnown RBP1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 NT5MQ9NPB1 228 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 SLC7A8Q9UHI5 535 aa1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 TRMT112Q9UI30 125 aaKnown RBP1.35□□□□□ -2.19
SMCHD1-206ENST00000581631 C15orf38-AP3S2A0A0A6YYH1 394 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 A0A1W2PNN7 141 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 A0A1W2PPE3 182 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 GPR89AB7ZAQ6 455 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 H0YCG3 227 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 L7N2F9 121 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 REM1O75628 298 aa1.34□□□□□ -2.19
SMCHD1-206ENST00000581631 CD3GP09693 182 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms