RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 UBE2NP61088 152 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 TUBA1BP68363 451 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 TUBA4AP68366 448 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 POU4F2Q12837 409 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 MED21Q13503 144 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 TAB1Q15750 504 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 SLC36A2Q495M3 483 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 C6orf141Q5SZD1 244 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 KRT80Q6KB66 452 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 C22orf34Q6ZV56 151 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 TUBA1AQ71U36 451 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 DPPA2Q7Z7J5 298 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 SYT9Q86SS6 491 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 OR51G2Q8NGK0 314 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 OR6N2Q8NGY6 317 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 OR52N5Q8NH56 324 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 NANOS1Q8WY41 292 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 RNFT2Q96EX2 444 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 WACQ9BTA9 647 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 KCNN2Q9H2S1 579 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 MRPS18AQ9NVS2 196 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 B3GNT2Q9NY97 397 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 UBAP1Q9NZ09 502 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 ASH2LQ9UBL3 628 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 CYB5R1Q9UHQ9 305 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 AMDHD2Q9Y303 409 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 RPL36Q9Y3U8 105 aaKnown RBP13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 SLC25A15Q9Y619 301 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 LHFPL6Q9Y693 200 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 DOPEY1Q5JWR5 2465 aa13.89□□□□□ -0.19
CSNK1D-212ENST00000580061 A0A1W2PR80 420 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 SPARCP09486 303 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 PPP3CBP16298 524 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 ZNF32P17041 273 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 NAA10P41227 235 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 RPS27P42677 84 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 SLC15A1P46059 708 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 CAPZA2P47755 286 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 CXCR4P61073 352 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 PIGFQ07326 219 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 AQP6Q13520 282 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 C1QTNF12Q5T7M4 302 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 SLC18B1Q6NT16 456 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 SLC16A9Q7RTY1 509 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 LINC00346Q8IVM7 164 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 HSD17B8Q92506 261 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 NOX3Q9HBY0 568 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 PLCXD1Q9NUJ7 323 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 EXOGQ9Y2C4 368 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 POLR1DQ9Y2S0 133 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 KLF2Q9Y5W3 355 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 TENM4Q6N022 2769 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 PRR14LQ5THK1 2151 aa13.88□□□□□ -0.19
CSNK1D-212ENST00000580061 C19orf84I3L1E1 186 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 J3QRE1 110 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 TMCC2O75069 709 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 APOL3O95236 402 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 CD79AP11912 226 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 PCBD1P61457 104 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 RAB1AP62820 205 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 HIST1H3AP68431 136 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 SNTB1Q13884 538 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 PPA1Q15181 289 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 GSG1Q2KHT4 349 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 HIST2H3PS2Q5TEC6 136 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 CORO6Q6QEF8 472 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 HIST2H3AQ71DI3 136 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 SHFQ7M4L6 423 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 CDC20BQ86Y33 519 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 OR4F15Q8NGB8 312 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 SMAP2Q8WU79 429 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 MUCL1Q96DR8 90 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 WFIKKN1Q96NZ8 548 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 YIPF3Q9GZM5 350 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 RNF121Q9H920 327 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 CCNB1IP1Q9NPC3 277 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 NDRG3Q9UGV2 375 aa13.87□□□□□ -0.19
CSNK1D-212ENST00000580061 SLC1A7O00341 560 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 XPNPEP2O43895 674 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 FAM20BO75063 409 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 WNT11O96014 354 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 THBDP07204 575 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 IGFBP2P18065 325 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 PAX7P23759 505 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 ATP6V1E1P36543 226 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 ARR3P36575 388 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 HCCSP53701 268 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 CSNK2BP67870 215 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 PSG4Q00888 419 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 SCRN3Q0VDG4 424 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 RAB40BQ12829 278 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 KLHL22Q53GT1 634 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 TMEM53Q6P2H8 277 aa13.86□□□□□ -0.19
CSNK1D-212ENST00000580061 CFAP77Q6ZQR2 320 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms