RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 CLDN25C9JDP6 229 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 NME4O00746 187 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 PPIHO43447 177 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 CCL2P13500 99 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 RHCEP18577 417 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 TCN1P20061 433 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 LAP3P28838 519 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 PRDX6P30041 224 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 CDAP32320 146 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 SRP14P37108 136 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 MDH1P40925 334 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 MAGEB1P43366 347 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ZNF81P51508 661 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ARHGDIAP52565 204 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 SLC7A2P52569 658 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 CCL8P80075 99 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 FMODQ06828 376 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 SCRN3Q0VDG4 424 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ENDOGQ14249 297 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 SGCAQ16586 387 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 HFEQ30201 348 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ACSM5Q6NUN0 579 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 PGM2L1Q6PCE3 622 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 RRM2BQ7LG56 351 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 VTCN1Q7Z7D3 282 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ADCK1Q86TW2 530 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ZNF101Q8IZC7 436 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 KLF14Q8TD94 323 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 RAB1CQ92928 201 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 DHRS1Q96LJ7 313 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 TSPAN32Q96QS1 320 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 EGLN1Q9GZT9 426 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 WNT5BQ9H1J7 359 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 SAP30LQ9HAJ7 183 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 NRIP3Q9NQ35 241 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 POLE4Q9NR33 117 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 DECR2Q9NUI1 292 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 HIF1ANQ9NWT6 349 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 GRHPRQ9UBQ7 328 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 FZR1Q9UM11 496 aa12.34□□□□□ -0.43
SMARCE1-213ENST00000578044 TEX13CA0A0J9YWL9 993 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 PRSS37A4D1T9 235 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 ATP8B1O43520 1251 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 PIP5K1CO60331 668 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 PTP4A3O75365 173 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 DEAF1O75398 565 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 TXNDC12O95881 172 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 LIMS1P48059 325 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 GSK3BP49841 420 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 KCNMB1Q16558 191 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF730Q6ZMV8 503 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 FKBP9P1Q75LS8 142 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 OR51A7Q8NH64 312 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 SLC7A13Q8TCU3 470 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 C4orf45Q96LM5 186 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 DCLRE1CQ96SD1 692 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 G6PC2Q9NQR9 355 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 DYSFO75923 2080 aa12.33□□□□□ -0.44
SMARCE1-213ENST00000578044 TRAV27A0A087WT01 109 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 FAM157AC9JC47 383 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 IFNL4K9M1U5 179 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 XKRYO14609 159 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 CDC42EP2O14613 210 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 GSTA4O15217 222 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 UBOX5O94941 541 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 NDUFB2O95178 105 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 FSTL3O95633 263 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 PNPP00491 289 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 GSTM3P21266 225 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 KITLGP21583 273 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 SDHAP31040 664 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 ERVS71-1P61550 626 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 PPP1CBP62140 327 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 ERVK-25P63136 954 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 CDK5R2Q13319 367 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 AQP6Q13520 282 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 CCNIQ14094 377 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 SPATS1Q496A3 300 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 TSEN54Q7Z6J9 526 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 NSMAFQ92636 917 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 HSH2DQ96JZ2 352 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 C7orf34Q96L11 122 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 MYLK2Q9H1R3 596 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 ZNF665Q9H7R5 613 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 GORASP2Q9H8Y8 452 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 SPAG4Q9NPE6 437 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 KRCC1Q9NPI7 259 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 DCAF13Q9NV06 445 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 VSX1Q9NZR4 365 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 SAMD4AQ9UPU9 718 aaKnown RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 SIGLEC7Q9Y286 467 aa12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 POLR3KQ9Y2Y1 108 aaPredicted RBP12.32□□□□□ -0.44
SMARCE1-213ENST00000578044 TENM1Q9UKZ4 2725 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms