RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 METTL15A6NJ78 407 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 SCG5P05408 212 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 KRT8P05787 483 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 CD1AP06126 327 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 HIST1H3AP68431 136 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 MED22Q15528 200 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 SGCAQ16586 387 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 TIGD6Q17RP2 521 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 HIST2H3PS2Q5TEC6 136 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 LYPD4Q6UWN0 246 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 PLXDC2Q6UX71 529 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 BEND4Q6ZU67 534 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 HIST2H3AQ71DI3 136 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 FAM220AQ7Z4H9 259 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 ZNF679Q8IYX0 411 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 UBE2J2Q8N2K1 259 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 SLC22A24Q8N4F4 322 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 OR13F1Q8NGS4 319 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 ST7LQ8TDW4 575 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 RNF133Q8WVZ7 376 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 OR8B4Q96RC9 309 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 USB1Q9BQ65 265 aaKnown RBP13.44□□□□□ -0.26
SS18-206ENST00000577572 ABHD6Q9BV23 337 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 MROQ9BYG7 248 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 FAM192AQ9GZU8 254 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 PROCRQ9UNN8 238 aa13.44□□□□□ -0.26
SS18-206ENST00000577572 EIF4E1BA6NMX2 242 aaKnown RBP13.43□□□□□ -0.26
SS18-206ENST00000577572 TOXO94900 526 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 INMTO95050 263 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 MPZL1O95297 269 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 CGAP01215 116 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 LCKP06239 509 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 CDAP32320 146 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 CA7P43166 264 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 TGM4P49221 684 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 GBX2P52951 348 aaPredicted RBP13.43□□□□□ -0.26
SS18-206ENST00000577572 SCRN3Q0VDG4 424 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 ECH1Q13011 328 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 ATMQ13315 3056 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 TPBGQ13641 420 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 EIF2B1Q14232 305 aaKnown RBP13.43□□□□□ -0.26
SS18-206ENST00000577572 RAB39AQ14964 217 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 ANKRD16Q6P6B7 361 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 ZNF813Q6ZN06 617 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 LINGO2Q7L985 606 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 GCNT2Q8N0V5 402 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 CNEP1R1Q8N9A8 125 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 STARD4Q96DR4 205 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 BCL7BQ9BQE9 202 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 C12orf49Q9H741 205 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 MOV10Q9HCE1 1003 aaKnown RBP13.43□□□□□ -0.26
SS18-206ENST00000577572 TAS2R16Q9NYV7 291 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 ATPIF1Q9UII2 106 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 COPS3Q9UNS2 423 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 POLR1DQ9Y2S0 133 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 LHFPL6Q9Y693 200 aa13.43□□□□□ -0.26
SS18-206ENST00000577572 DSPP15924 2871 aaKnown RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 ZZEF1O43149 2961 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 A6NHS1 94 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ZNF701M0R085 212 aaPredicted RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 MSTNO14793 375 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ZNHIT1O43257 154 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 GPANK1O95872 356 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 APOC1P02654 83 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 COX5AP20674 150 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 PSMB9P28065 219 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 GP2P55259 537 aaKnown RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 ARF1P84077 181 aaKnown RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 FAPQ12884 760 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 NFATC3Q12968 1075 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ENDOGQ14249 297 aaKnown RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 SLC36A2Q495M3 483 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ARMCX4Q5H9R4 360 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 OR7E24Q6IFN5 339 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 FDX2Q6P4F2 183 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 VASH1Q7L8A9 365 aaPredicted RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 DCXRQ7Z4W1 244 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 GABRG1Q8N1C3 465 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 C17orf78Q8N4C9 275 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 SPRYD4Q8WW59 207 aaPredicted RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 ZNF837Q96EG3 531 aaPredicted RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 OR5M11Q96RB7 305 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 DMRTA2Q96SC8 542 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 TBX5Q99593 518 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ZNF416Q9BWM5 594 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 DDX28Q9NUL7 540 aaKnown RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 ASH2LQ9UBL3 628 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
SS18-206ENST00000577572 TIMM10BQ9Y5J6 103 aa13.42□□□□□ -0.26
SS18-206ENST00000577572 ACOD1A6NK06 481 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 ZNF878C9JN71 531 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 J3QLW9 94 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 CCRL2O00421 344 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 ABHD16AO95870 558 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 CPEP16870 476 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 ZNF19P17023 458 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 GALP22466 123 aa13.41□□□□□ -0.26
SS18-206ENST00000577572 PSMA1P25786 263 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms