RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 RNASEKQ6P5S7 137 aaKnown RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 TTC33Q6PID6 262 aaPredicted RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 WDR59Q6PJI9 974 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 TMEM107Q6UX40 140 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 PLEKHG7Q6ZR37 379 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 UTS2BQ765I0 119 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ERASQ7Z444 233 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 GOLGA7Q7Z5G4 137 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CYP4Z1Q86W10 505 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 IQCKQ8N0W5 287 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 SYT14Q8NB59 555 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 FBXL13Q8NEE6 735 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 PROKR2Q8NFJ6 384 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 OR8K1Q8NGG5 319 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 RHEBL1Q8TAI7 183 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ADAMTS16Q8TE57 1224 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 GIPC3Q8TF64 312 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 SPRYD4Q8WW59 207 aaPredicted RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 CACNG8Q8WXS5 425 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 RAD51AP1Q96B01 352 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ECHDC3Q96DC8 303 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 CERS2Q96G23 380 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 MAGEB18Q96M61 343 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 WRAP53Q9BUR4 548 aaKnown RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 ELOVL6Q9H5J4 265 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 DMAC2Q9NW81 257 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 PIPOXQ9P0Z9 390 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 RAB23Q9ULC3 237 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 VANGL2Q9ULK5 521 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 RBMX2Q9Y388 322 aaKnown RBP3.59□□□□□ -1.83
NUP88-213ENST00000576862 IGSF9BQ9UPX0 1349 aa3.59□□□□□ -1.83
NUP88-213ENST00000576862 ATRXP46100 2492 aa3.59□□□□□ -1.84
NUP88-213ENST00000576862 PPIAL4EA0A075B759 164 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 TRBV11-1A0A0K0K1C0 115 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ARGFXA6NJG6 315 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 A8MUA0 341 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ANKRD63C9JTQ0 380 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CLDN5O00501 218 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 SLC16A4O15374 487 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 STX7O15400 261 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 GATCO43716 136 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 NDUFS6O75380 124 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 SERF1AO75920 110 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 H6PDO95479 791 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 PGK1P00558 417 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 SERPIND1P05546 499 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CA3P07451 260 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ERCC1P07992 297 aaPredicted RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 OCMP0CE72 109 aaPredicted RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 SLC35E2BP0CK96 405 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 PPIAL4FP0DN26 164 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CD1EP15812 388 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CTRB1P17538 263 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CNR1P21554 472 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 IL12BP29460 328 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 HNRNPH3P31942 346 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 CSNK1DP48730 415 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CDC34P49427 236 aaPredicted RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 MAGOHP61326 146 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 GTF2BQ00403 316 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ZP4Q12836 540 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 PMS2P3Q13401 168 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CAPRIN1Q14444 709 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 MESDQ14696 234 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 SLC5A12Q1EHB4 618 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 GOLGA7BQ2TAP0 167 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ALKBH6Q3KRA9 238 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CELF3Q5SZQ8 465 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 CTRB2Q6GPI1 263 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 PYHIN1Q6K0P9 492 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 LEG1Q6P5S2 330 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 FAM151BQ6UXP7 276 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 Q6ZVH6 145 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ABHD12BQ7Z5M8 362 aaPredicted RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 CBWD2Q8IUF1 395 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 C10orf67Q8IYJ2 551 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 SELENOHQ8IZQ5 122 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 GABRG1Q8N1C3 465 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 FAM86B1Q8N7N1 296 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 TMEM161BQ8NDZ6 487 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 FAM83FQ8NEG4 500 aaPredicted RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 OR4A15Q8NGL6 344 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 WDR36Q8NI36 951 aaKnown RBP3.58□□□□□ -1.84
NUP88-213ENST00000576862 PIGCQ92535 297 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ASB9Q96DX5 294 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 CEP170P1Q96L14 293 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 TECTBQ96PL2 329 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 TIPINQ9BVW5 301 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 LYRM4Q9HD34 91 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 SMOXQ9NWM0 555 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 MS4A12Q9NXJ0 267 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ZNF639Q9UID6 485 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 PPIAL4AQ9Y536 164 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 FLVCR1Q9Y5Y0 555 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 ADGRA3Q8IWK6 1321 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 PAPPA2Q9BXP8 1791 aa3.58□□□□□ -1.84
NUP88-213ENST00000576862 SMCO3A2RU48 225 aa3.57□□□□□ -1.84
NUP88-213ENST00000576862 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms