RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TBC1D15Q8TC07 691 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 SSMEM1Q8WWF3 244 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 DYRK2Q92630 601 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 TAF15Q92804 592 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMG6-218ENST00000575454 MPP4Q96JB8 637 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 C4orf45Q96LM5 186 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 COG8Q96MW5 612 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 ZNF347Q96SE7 839 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 MCHR1Q99705 422 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 PAIP1Q9H074 479 aaKnown RBP7.55□□□□□ -1.2
SMG6-218ENST00000575454 TMEM38AQ9H6F2 299 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 WDR55Q9H6Y2 383 aaPredicted RBP7.55□□□□□ -1.2
SMG6-218ENST00000575454 TCF7L1Q9HCS4 588 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 THAP1Q9NVV9 213 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 C1RLQ9NZP8 487 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 NDRG4Q9ULP0 352 aaKnown RBP7.55□□□□□ -1.2
SMG6-218ENST00000575454 CORO2BQ9UQ03 480 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 RNF114Q9Y508 228 aa7.55□□□□□ -1.2
SMG6-218ENST00000575454 TRAV40A0A0B4J280 105 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 LRRC30A6NM36 301 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 BLOC1S5-TXNDC5H3BN57 136 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 TMEM178BH3BS89 294 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 UBDO15205 165 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 CLPXO76031 633 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 FSTL3O95633 263 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 ASAH2BP0C7U1 165 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 UMPSP11172 480 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
SMG6-218ENST00000575454 ACADSP16219 412 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 ZNF32P17041 273 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 PSG4Q00888 419 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 BST1Q10588 318 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 PSG7Q13046 419 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 SCARB2Q14108 478 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 SGCAQ16586 387 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 C2orf68Q2NKX9 166 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 RFPL4BQ6ZWI9 263 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 COMTD1Q86VU5 262 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 JAZF1Q86VZ6 243 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 OR2Z1Q8NG97 314 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 FNDC8Q8TC99 324 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 NEIL1Q96FI4 390 aaPredicted RBP7.54□□□□□ -1.2
SMG6-218ENST00000575454 WACQ9BTA9 647 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 TMEM109Q9BVC6 243 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 OR2H1Q9GZK4 316 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 TBCCD1Q9NVR7 557 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 DCAF16Q9NXF7 216 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 ASH2LQ9UBL3 628 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 GMEB1Q9Y692 573 aa7.54□□□□□ -1.2
SMG6-218ENST00000575454 TENM3Q9P273 2699 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 TRAPPC13A5PLN9 417 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 C5orf63A6NC05 138 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 NPIPB13A6NJU9 1138 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 EVPLLA8MZ36 301 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 NPIPB4C9JG80 1138 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 RGS16O15492 202 aaPredicted RBP7.53□□□□□ -1.2
SMG6-218ENST00000575454 TPST2O60704 377 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 TRMUO75648 421 aaKnown RBP7.53□□□□□ -1.2
SMG6-218ENST00000575454 ABHD16AO95870 558 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 CST2P09228 141 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 KITLGP21583 273 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 CDAP32320 146 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 RELBQ01201 579 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 NPTX1Q15818 432 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 LRIF1Q5T3J3 769 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 ZNF774Q6NX45 483 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 SLC2A7Q6PXP3 512 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 BRD3OSQ6XYD6 125 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 VASH1Q7L8A9 365 aaPredicted RBP7.53□□□□□ -1.2
SMG6-218ENST00000575454 REC114Q7Z4M0 266 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 SYT9Q86SS6 491 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 C1orf87Q8N0U7 546 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 OR8B3Q8NGG8 313 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 AKR7LQ8NHP1 331 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 ASB10Q8WXI3 467 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 NABP1Q96AH0 204 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 DACT3Q96B18 629 aaPredicted RBP7.53□□□□□ -1.2
SMG6-218ENST00000575454 MAELQ96JY0 434 aaKnown RBP7.53□□□□□ -1.2
SMG6-218ENST00000575454 RBP7Q96R05 134 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 OR2V2Q96R30 315 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 OR8B2Q96RD0 313 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 SIGLEC11Q96RL6 698 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 NUDT16L1Q9BRJ7 211 aaKnown RBP7.53□□□□□ -1.2
SMG6-218ENST00000575454 CHIAQ9BZP6 476 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 MARCH7Q9H992 704 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 TMEM165Q9HC07 324 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 INIPQ9NRY2 104 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 TNFRSF19Q9NS68 423 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 ANGPT4Q9Y264 503 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 UGT2A1Q9Y4X1 527 aa7.53□□□□□ -1.2
SMG6-218ENST00000575454 MDFIC2A0A1B0GVS7 189 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 CPSF4LA6NMK7 179 aaKnown RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 C12orf71A8MTZ7 269 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 P2RY10O00398 339 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 KPNA4O00629 521 aaPredicted RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 PHYHO14832 338 aa7.52□□□□□ -1.21
SMG6-218ENST00000575454 TNFRSF13BO14836 293 aaPredicted RBP7.52□□□□□ -1.21
SMG6-218ENST00000575454 ENSAO43768 121 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms