RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GABRA1P14867 456 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 M6PRP20645 277 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 HTR2CP28335 458 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 H2BFSP57053 126 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 SEC61A1P61619 476 aaKnown RBP8.02□□□□□ -1.13
NCBP3-204ENST00000574911 GLO1Q04760 184 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 TDGQ13569 410 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 PCK2Q16822 640 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 STEAP1BQ6NZ63 245 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 GABRG1Q8N1C3 465 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 MUC20Q8N307 709 aaPredicted RBP8.02□□□□□ -1.13
NCBP3-204ENST00000574911 TMEM229BQ8NBD8 167 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 OR5M1Q8NGP8 315 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 ASB10Q8WXI3 467 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF501Q96CX3 271 aaPredicted RBP8.02□□□□□ -1.13
NCBP3-204ENST00000574911 SEH1LQ96EE3 360 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 NKX3-1Q99801 234 aaPredicted RBP8.02□□□□□ -1.13
NCBP3-204ENST00000574911 ALX4Q9H161 411 aaPredicted RBP8.02□□□□□ -1.13
NCBP3-204ENST00000574911 C1orf198Q9H425 327 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 NARFLQ9H6Q4 476 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 APMAPQ9HDC9 416 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 G6PC2Q9NQR9 355 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 PCDH15Q96QU1 1955 aa8.02□□□□□ -1.13
NCBP3-204ENST00000574911 ANKUB1A6NFN9 424 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 A6NIZ1 184 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 I3L521 148 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 SOX1O00570 391 aaPredicted RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 NUDT21O43809 227 aaKnown RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 DUX1O43812 170 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 DOK2O60496 412 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 RGS11O94810 467 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 SIX6O95475 246 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ITGB2P05107 769 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 CD2P06729 351 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF250P15622 560 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ACHEP22303 614 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ARRB1P49407 418 aaPredicted RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ACTBP60709 375 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 RAP1BP61224 184 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 RAP1AP62834 184 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ACTG1P63261 375 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 RNF4P78317 190 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 MPPED2Q15777 294 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 IDO2Q6ZQW0 420 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 HDDC2Q7Z4H3 204 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 PRSS42Q7Z5A4 293 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 LYPD6Q86Y78 171 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 WDFY1Q8IWB7 410 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 KDM8Q8N371 416 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 SLC26A10Q8NG04 563 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 OR6M1Q8NGM8 313 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ST7LQ8TDW4 575 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 TMEM234Q8WY98 164 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 DVL3Q92997 716 aaPredicted RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 WBP1Q96G27 269 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 SLC25A44Q96H78 314 aaPredicted RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 NPAS1Q99742 590 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 CHST6Q9GZX3 395 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 SCPEP1Q9HB40 452 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 OR52A1Q9UKL2 312 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 EMC9Q9Y3B6 208 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 RHBDD3Q9Y3P4 386 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 MRPS18BQ9Y676 258 aaKnown RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 LOC390937A0A1W2PQ73 354 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 MEGF11A6BM72 1044 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ZSCAN5BA6NJL1 495 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 F5H5P2 479 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 GOSR2O14653 212 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 LPLP06858 475 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF35P13682 527 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 TAS2R19P59542 299 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 HLXQ14774 488 aaPredicted RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 C1orf100Q5SVJ3 147 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 GLYATL3Q5SZD4 288 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 COX15Q7KZN9 410 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ADGRE4PQ86SQ3 457 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 CDH26Q8IXH8 852 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF248Q8NDW4 579 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 OR51A2Q8NGJ7 313 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 OR13C3Q8NGS6 347 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 OR8S1Q8NH09 359 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 LRRC20Q8TCA0 184 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ST8SIA1Q92185 356 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 RELTQ969Z4 430 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 SLC22A11Q9NSA0 550 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 CTSFQ9UBX1 484 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 CGGBP1Q9UFW8 167 aaPredicted RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 NUP50Q9UKX7 468 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 HHLA2Q9UM44 414 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 A0A0A6YYH2 397 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 A6NJ64 397 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 NPIPB13A6NJU9 1138 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 NPIPB4C9JG80 1138 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 B3GALNT1O75752 331 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 AQP8O94778 261 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 ZNF823P16415 610 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 DNASE1L1P49184 302 aa8.01□□□□□ -1.13
NCBP3-204ENST00000574911 UBE2MP61081 183 aaKnown RBP8.01□□□□□ -1.13
NCBP3-204ENST00000574911 B3GNTL1Q67FW5 361 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms