RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 DBPQ10586 325 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 TRIP10Q15642 601 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 GPR139Q6DWJ6 353 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 SMARCD3Q6STE5 483 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 DPY19L2P2Q6ZN68 376 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 PTCHD4Q6ZW05 846 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 ALDH16A1Q8IZ83 802 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF786Q8N393 782 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF540Q8NDQ6 660 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 ERMAPQ96PL5 475 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 GPX7Q96SL4 187 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 IL1RAPQ9NPH3 570 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 TMCC3Q9ULS5 477 aa15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 COA3Q9Y2R0 106 aaPredicted RBP15.23■□□□□ 0.03
CTDNEP1-207ENST00000572043 NF1P21359 2839 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 KHDRBS3O75525 346 aaKnown RBP15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 NCR1O76036 304 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 GPANK1O95872 356 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF250P15622 560 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 COL8A2P25067 703 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 MPV17P39210 176 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 CDKN2AP42771 156 aaKnown RBP15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 ELFN2Q5R3F8 820 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 RFPL4BQ6ZWI9 263 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 ABHD4Q8TB40 342 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 SNX33Q8WV41 574 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 SAMD8Q96LT4 415 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 TSSK2Q96PF2 358 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 SNX18Q96RF0 628 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 NUAK2Q9H093 628 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 OR52D1Q9H346 318 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 CHODLQ9H9P2 273 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 HINT3Q9NQE9 182 aaKnown RBP15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 CR1P17927 2039 aa15.22■□□□□ 0.03
CTDNEP1-207ENST00000572043 FN1P02751 2386 aaKnown RBP15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 IGLV3-9A0A075B6K5 115 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 LOC100289279A0A1B0GTE1 492 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 AHCYL1O43865 530 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 DOK2O60496 412 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 NGFP01138 241 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 ZNF23P17027 643 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 CALB2P22676 271 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 FPR3P25089 353 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 SLC6A6P31641 620 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 IFNGR2P38484 337 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 GZMKP49863 264 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 PPP1R8Q12972 351 aaKnown RBP15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 RFX4Q33E94 735 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 SPATS1Q496A3 300 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 TMEM154Q6P9G4 183 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 ADCK1Q86TW2 530 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 SLC25A40Q8TBP6 338 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 YIPF5Q969M3 257 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 MSI2Q96DH6 328 aaKnown RBP15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 SOX7Q9BT81 388 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 IFT27Q9BW83 186 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 OR2J1Q9GZK6 312 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 NARFLQ9H6Q4 476 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 SLCO1C1Q9NYB5 712 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 VSX1Q9NZR4 365 aaPredicted RBP15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 ACTR3BQ9P1U1 418 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 GPR160Q9UJ42 338 aa15.21■□□□□ 0.03
CTDNEP1-207ENST00000572043 PLCE1Q9P212 2302 aa15.21■□□□□ 0.02
CTDNEP1-207ENST00000572043 SETD2Q9BYW2 2564 aaPredicted RBP15.21■□□□□ 0.02
CTDNEP1-207ENST00000572043 C17orf100A8MU93 164 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 TNFRSF11BO00300 401 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 TPD52L2O43399 206 aaKnown RBP15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 CDC14BO60729 498 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 T-ENOLP0DO92 83 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 GIFP27352 417 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 GCH1P30793 250 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 IL2RGP31785 369 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 HTR5AP47898 357 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 CCL8P80075 99 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 RIN1Q13671 783 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 CCNIQ14094 377 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 PGBD2Q6P3X8 592 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 LEG1Q6P5S2 330 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 JAZF1Q86VZ6 243 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 DHFR2Q86XF0 187 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 HIPK1Q86Z02 1210 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 GLB1L2Q8IW92 636 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 OR9Q2Q8NGE9 314 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 OR4K13Q8NH42 304 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 GNPDA2Q8TDQ7 276 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 IPCEF1Q8WWN9 437 aaPredicted RBP15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 RDH5Q92781 318 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 CCDC124Q96CT7 223 aaKnown RBP15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 CLPTM1LQ96KA5 538 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 C4orf45Q96LM5 186 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 NMNAT3Q96T66 252 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 ASH2LQ9UBL3 628 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 POLR1DQ9Y2S0 133 aa15.2■□□□□ 0.02
CTDNEP1-207ENST00000572043 TCRBV5S2A0A599 114 aa15.19■□□□□ 0.02
CTDNEP1-207ENST00000572043 DCTN6O00399 190 aa15.19■□□□□ 0.02
CTDNEP1-207ENST00000572043 SGCEO43556 437 aa15.19■□□□□ 0.02
CTDNEP1-207ENST00000572043 SPRY3O43610 288 aa15.19■□□□□ 0.02
CTDNEP1-207ENST00000572043 LILRA1O75019 489 aa15.19■□□□□ 0.02
CTDNEP1-207ENST00000572043 ABHD16AO95870 558 aa15.19■□□□□ 0.02
CTDNEP1-207ENST00000572043 TXNDC12O95881 172 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms