RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 KDM4DQ6B0I6 523 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 ACSM5Q6NUN0 579 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 ADAM5Q6NVV9 412 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 SLC27A4Q6P1M0 643 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 CLEC2AQ6UVW9 174 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 P2RY8Q86VZ1 359 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 LNX2Q8N448 690 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 C17orf78Q8N4C9 275 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 SLC22A24Q8N4F4 322 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 SLC37A3Q8NCC5 494 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 OR9Q1Q8NGQ5 310 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 FNDC8Q8TC99 324 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 DNAJC9Q8WXX5 260 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 NMD3Q96D46 503 aaKnown RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 PLEKHA8Q96JA3 519 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 RBM4BQ9BQ04 359 aaKnown RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 RBM4Q9BWF3 364 aaKnown RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 OR10A4Q9H209 315 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 FAIMQ9NVQ4 179 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 TMEM38BQ9NVV0 291 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 TVP23BQ9NYZ1 205 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 BAIAP2Q9UQB8 552 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 COA3Q9Y2R0 106 aaPredicted RBP11.57□□□□□ -0.56
CCDC40-205ENST00000571028 AMDHD2Q9Y303 409 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 ORC6Q9Y5N6 252 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 SLC25A15Q9Y619 301 aa11.57□□□□□ -0.56
CCDC40-205ENST00000571028 ABCA1O95477 2261 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 OR6C68A6NDL8 312 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 FAM183AA6NL82 134 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 RIIAD1A6NNX1 92 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 M0R129 80 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 SPRY1O43609 319 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 MPZL1O95297 269 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 FARS2O95363 451 aaKnown RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 IFNGP01579 166 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 OR8G3PP0DMU2 310 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 PYCR1P32322 319 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 GRK5P34947 590 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 POLR2IP36954 125 aaKnown RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 DAG1Q14118 895 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 CRMP1Q14194 572 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 PTGES3Q15185 160 aaKnown RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 C10orf128Q5T292 105 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 LPCAT4Q643R3 524 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 CYB5R2Q6BCY4 276 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 ZBTB49Q6ZSB9 765 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 SLC16A14Q7RTX9 510 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 SKA3Q8IX90 412 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 GALNT4Q8N4A0 578 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 NPEPL1Q8NDH3 523 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 OR51L1Q8NGJ5 315 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 SLC29A1Q99808 456 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 C9orf16Q9BUW7 83 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 MED20Q9H944 212 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 EMC7Q9NPA0 242 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 VSX1Q9NZR4 365 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 TMEFF2Q9UIK5 374 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 KLHL21Q9UJP4 597 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 GDF2Q9UK05 429 aaPredicted RBP11.56□□□□□ -0.56
CCDC40-205ENST00000571028 UGT2A1Q9Y4X1 527 aa11.56□□□□□ -0.56
CCDC40-205ENST00000571028 IGHV4-30-2A0A087WSY4 118 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF503-AS2A6NEH8 195 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 DCTN6O00399 190 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 AHCYL1O43865 530 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 NDUFS7O75251 213 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 HLA-DQA2P01906 255 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 SCG5P05408 212 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 GYPBP06028 91 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 DANCRP0C864 163 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 HNF1AP20823 631 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 LAP3P28838 519 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 CRABP1P29762 137 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 PTDSS1P48651 473 aaKnown RBP11.55□□□□□ -0.56
CCDC40-205ENST00000571028 DSCR9P59020 149 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 ESRRGP62508 458 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 CDK5Q00535 292 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 SNAPC1Q16533 368 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF672Q499Z4 452 aaPredicted RBP11.55□□□□□ -0.56
CCDC40-205ENST00000571028 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 UGT2A3Q6UWM9 527 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 DNM1P46Q6ZS02 220 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 MDP1Q86V88 176 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 OR6V1Q8N148 313 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 FGFBP3Q8TAT2 258 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 TEX12Q9BXU0 123 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 KCNN2Q9H2S1 579 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 CCNB1IP1Q9NPC3 277 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 B9D1Q9UPM9 204 aa11.55□□□□□ -0.56
CCDC40-205ENST00000571028 ARPC4-TTLL3A0A0A6YYG9 625 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 DPRXA6NFQ7 191 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 RAB36O95755 333 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 HMGN1P05114 100 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 CELA3BP08861 270 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 CLUP10909 449 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF16P17020 682 aaPredicted RBP11.54□□□□□ -0.56
CCDC40-205ENST00000571028 ZNF3P17036 446 aa11.54□□□□□ -0.56
CCDC40-205ENST00000571028 NPR2P20594 1047 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms