RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TXNDC12O95881 172 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PDYNP01213 254 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GASTP01350 101 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 IFNA10P01566 189 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 IFNGP01579 166 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 C1QCP02747 245 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 STATHP02808 62 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 C8GP07360 202 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 FBP1P09467 338 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SMIM6P0DI80 62 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PPIAL4GP0DN37 164 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GABRG2P18507 467 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GCSHP23434 173 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PRPH2P23942 346 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RPL10P27635 214 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 HTR2CP28335 458 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 IMPA1P29218 277 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SHMT2P34897 504 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PPOXP50336 477 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 ATP4BP51164 291 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 XKP51811 444 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 DGKQP52824 942 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PLA2G16P53816 162 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 ADPRHP54922 357 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 FGF8P55075 233 aaPredicted RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 VSX2P58304 361 aaPredicted RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 RPL38P63173 70 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 RPL19P84098 196 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 MS4A2Q01362 244 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 DHODHQ02127 395 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TNP2Q05952 138 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 EGR3Q06889 387 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 DPTQ07507 201 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TCF15Q12870 199 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GRIK2Q13002 908 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CEACAM7Q14002 265 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CCNIQ14094 377 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PSG5Q15238 335 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 MRPL23Q16540 153 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 RFX4Q33E94 735 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TTLL9Q3SXZ7 439 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 VPS26BQ4G0F5 336 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SYTL3Q4VX76 610 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RFTN2Q52LD8 501 aaPredicted RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 PAGE3Q5JUK9 113 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SPIN3Q5JUX0 258 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 C6orf141Q5SZD1 244 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 UTF1Q5T230 341 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLC22A10Q63ZE4 541 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 FAM90A2PQ658T7 463 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RBMS3Q6XE24 437 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 GDPD3Q7L5L3 318 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SSX7Q7RTT5 188 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLC16A14Q7RTX9 510 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 PRSS45Q7RTY3 260 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 THOC6Q86W42 341 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 RNF130Q86XS8 419 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SFTPA2Q8IWL1 248 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLC22A15Q8IZD6 547 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RNF113BQ8IZP6 322 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 DEFB119Q8N690 84 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TMEM251Q8N6I4 163 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 EXD3Q8N9H8 876 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 HSD17B11Q8NBQ5 300 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 ZNF738Q8NE65 137 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 NLGN4YQ8NFZ3 816 aaPredicted RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 OR10W1Q8NGF6 305 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 OR5AN1Q8NGI8 311 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 OR5AR1Q8NGP9 310 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CCL4L1Q8NHW4 92 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 STOML3Q8TAV4 291 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TMEM163Q8TC26 289 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TMEM171Q8WVE6 324 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RPL3LQ92901 407 aaKnown RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 PTH2Q96A98 100 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TMEM159Q96B96 161 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CREB3L1Q96BA8 519 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 OTULINQ96BN8 352 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 ROPN1LQ96C74 230 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 FBXL8Q96CD0 374 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 C10orf35Q96D05 121 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 MED8Q96G25 268 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 CCDC120Q96HB5 630 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GUCD1Q96NT3 240 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 OR2V2Q96R30 315 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 IL4I1Q96RQ9 567 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RNF2Q99496 336 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 HOPXQ9BPY8 73 aaPredicted RBP3.19□□□□□ -1.9
SMG6-208ENST00000570874 CCDC3Q9BQI4 270 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TCEAL7Q9BRU2 100 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 IFT27Q9BW83 186 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 C1QTNF5Q9BXJ0 243 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 IL1RL2Q9HB29 575 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RHOFQ9HBH0 211 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 RDH14Q9HBH5 336 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 SLC52A3Q9NQ40 469 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 TIGARQ9NQ88 270 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 POLE4Q9NR33 117 aa3.19□□□□□ -1.9
SMG6-208ENST00000570874 GSN-AS1Q9NRJ2 163 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms