RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 COA3Q9Y2R0 106 aaPredicted RBP11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 CDH10Q9Y6N8 788 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
HERPUD1-218ENST00000569569 TCRBV3S1A0A5B6 114 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 GPRIN2O60269 458 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 RENP00797 406 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 HIST1H1CP16403 213 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 GSTM3P21266 225 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 CCNOP22674 350 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 PCSK6P29122 969 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 RAD52P43351 418 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 PPOXP50336 477 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 UCP2P55851 309 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 DSCR9P59020 149 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 LSM6P62312 80 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 RGS7BPQ6MZT1 257 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 LEG1Q6P5S2 330 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 UGT2A3Q6UWM9 527 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 SVOPLQ8N434 492 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 PAQR4Q8N4S7 273 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 OR4K13Q8NH42 304 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 AKR7LQ8NHP1 331 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 GIPC3Q8TF64 312 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 POM121L2Q96KW2 1035 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 FOXN4Q96NZ1 517 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 NMNAT3Q96T66 252 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 RHNO1Q9BSD3 238 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 BCL2L14Q9BZR8 327 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 OR2H1Q9GZK4 316 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 RAB1BQ9H0U4 201 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 WNT5BQ9H1J7 359 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 SRA1Q9HD15 236 aaKnown RBP11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 EMC7Q9NPA0 242 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 ABCA1O95477 2261 aa11.9□□□□□ -0.5
HERPUD1-218ENST00000569569 FAM171A2A8MVW0 826 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 BHLHE40O14503 412 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 SMAD7O15105 426 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 FAM157BP0CG42 384 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 GDI2P50395 445 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 SCRN3Q0VDG4 424 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 COX10Q12887 443 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 KCNMB1Q16558 191 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 MSMPQ1L6U9 139 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 CLEC12AQ5QGZ9 265 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 CLEC2AQ6UVW9 174 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 UNQ6126/PRO20091Q6UXV3 157 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 PAPD5Q8NDF8 572 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 OR10G2Q8NGC3 310 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 TSSK2Q96PF2 358 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 SORCS2Q96PQ0 1159 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 PLA2G12AQ9BZM1 189 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 GSX1Q9H4S2 264 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 EIF3KQ9UBQ5 218 aaKnown RBP11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 FKBP7Q9Y680 259 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 TLN2Q9Y4G6 2542 aa11.89□□□□□ -0.51
HERPUD1-218ENST00000569569 LOC100509620A0A075B734 347 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 C5orf49A4QMS7 147 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 OR6C68A6NDL8 312 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 ARRDC5A6NEK1 342 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 DCTN6O00399 190 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 FKBP6O75344 327 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 MPZL1O95297 269 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 LCKP06239 509 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 ERCC1P07992 297 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 CSF3P09919 207 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 COX5BP10606 129 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 CENPAP49450 140 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 SELENOVP59797 346 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 CBX1P83916 185 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 AQP6Q13520 282 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 SLC35F1Q5T1Q4 408 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 ZNF774Q6NX45 483 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 CD300LDQ6UXZ3 194 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 ZBTB46Q86UZ6 589 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 OR6V1Q8N148 313 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 SDR9C7Q8NEX9 313 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 OR10H5Q8NGA6 315 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 OR52E2Q8NGJ4 325 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 C11orf40Q8WZ69 217 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 FEVQ99581 238 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 SMR3AQ99954 134 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 TSSK6Q9BXA6 273 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 REG4Q9BYZ8 158 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 RACGAP1Q9H0H5 632 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 OR51B6Q9H340 312 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 DYNLRB1Q9NP97 96 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 TBC1D23Q9NUY8 699 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 NDRG4Q9ULP0 352 aaKnown RBP11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 BAIAP2Q9UQB8 552 aa11.88□□□□□ -0.51
HERPUD1-218ENST00000569569 ZANQ9Y493 2812 aa11.87□□□□□ -0.51
HERPUD1-218ENST00000569569 IGLV1-36A0A0B4J1U3 117 aa11.87□□□□□ -0.51
HERPUD1-218ENST00000569569 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
HERPUD1-218ENST00000569569 SGCEO43556 437 aa11.87□□□□□ -0.51
HERPUD1-218ENST00000569569 SYNGR3O43761 229 aa11.87□□□□□ -0.51
HERPUD1-218ENST00000569569 E2F6O75461 281 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms