RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NDUFAF7Q7L592 441 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 DND1Q8IYX4 353 aaKnown RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 LINC00518Q8N0U6 118 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 HAVCR2Q8TDQ0 301 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 GPR148Q8TDV2 347 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 DVL3Q92997 716 aaPredicted RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 OR6C1Q96RD1 312 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 METTL17Q9H7H0 456 aaPredicted RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 FBXL3Q9UKT7 428 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 FOXJ3Q9UPW0 622 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 TRAV18A0A075B6X5 111 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 PRSS37A4D1T9 235 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 HSBP1L1C9JCN9 74 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 H3BMH7 237 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 ABHD16AO95870 558 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 RLN1P04808 185 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 KIR3DL2P43630 455 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 PTH2RP49190 550 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 SELENOPP49908 381 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 P2RX1P51575 399 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 TAS2R20P59543 309 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 RAB14P61106 215 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 RPL27P61353 136 aaKnown RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 MFGE8Q08431 387 aaPredicted RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 TIGD3Q6B0B8 471 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 OR10K2Q6IF99 312 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 FDX2Q6P4F2 183 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 OR52B4Q8NGK2 314 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 OR2T35Q8NGX2 323 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 OTOSQ8NHW6 89 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 HYLS1Q96M11 299 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 PTDSS2Q9BVG9 487 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 NIPAL2Q9H841 368 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 EXOSC3Q9NQT5 275 aaKnown RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 CGGBP1Q9UFW8 167 aaPredicted RBP7.88□□□□□ -1.15
LINC00558-201ENST00000569422 TINAGQ9UJW2 476 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 CELSR3Q9NYQ7 3312 aa7.88□□□□□ -1.15
LINC00558-201ENST00000569422 NUDT21O43809 227 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 TRIM3O75382 744 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GUSBP08236 651 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 IFNGR1P15260 489 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GLB1P16278 677 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF81P51508 661 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 AFF3P51826 1226 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 POLR2HP52434 150 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 P2RX3P56373 397 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 POU3F1Q03052 451 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 PCGF3Q3KNV8 242 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 LINC00303Q3SY05 128 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 DMRTC1Q5HYR2 192 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 SLC22A10Q63ZE4 541 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 C17orf82Q86X59 251 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 PLCZ1Q86YW0 608 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF248Q8NDW4 579 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF501Q96CX3 271 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 NXPE2Q96DL1 559 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 DPCDQ9BVM2 203 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GTPBP2Q9BX10 602 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 NOX3Q9HBY0 568 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 SLC22A11Q9NSA0 550 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 MRPL22Q9NWU5 206 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 KLRF1Q9NZS2 232 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 MRPS17Q9Y2R5 130 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 EMC9Q9Y3B6 208 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 FREM2Q5SZK8 3169 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GPR171O14626 319 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 CBR3O75828 277 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 PSMB1P20618 241 aaKnown RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 DNASE1P24855 282 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 HTD2P86397 168 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 SPOCK1Q08629 439 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ISXQ2M1V0 245 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF627Q7L945 461 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GPAT4Q86UL3 456 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZNF227Q86WZ6 799 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 D2HGDHQ8N465 521 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 AGBL5Q8NDL9 886 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 OR11G2Q8NGC1 345 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 OR2I1PQ8NGU4 316 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 DCBLD2Q96PD2 775 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GON7Q9BXV9 100 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ATG5Q9H1Y0 275 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ZCCHC4Q9H5U6 513 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 AKIRIN1Q9H9L7 192 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 TMEM14AQ9Y6G1 99 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 A8MVM7 634 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GABARAPH6UMI1 98 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 CSN2P05814 226 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 ITGA5P08648 1049 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 BMI1P35226 326 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 TNK1Q13470 666 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 CARD17Q5XLA6 110 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 SLC18B1Q6NT16 456 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 JMJD6Q6NYC1 403 aaPredicted RBP7.87□□□□□ -1.15
LINC00558-201ENST00000569422 GUSBP11Q6P575 273 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 LRRTM1Q86UE6 522 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 WDFY1Q8IWB7 410 aa7.87□□□□□ -1.15
LINC00558-201ENST00000569422 JAGN1Q8N5M9 183 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms