RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	MRPL37	Q9BZE1	423 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	DPY30	Q9C005	99 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	LRRN3	Q9H3W5	708 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	OSGEPL1	Q9H4B0	414 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	ACTL8	Q9H568	366 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	RNF167	Q9H6Y7	350 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	METTL17	Q9H7H0	456 aa	Predicted RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	SGK2	Q9HBY8	427 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	B3GAT2	Q9NPZ5	323 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	TMEM100	Q9NV29	134 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	C14orf105	Q9NVL8	296 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	WSB2	Q9NYS7	404 aa	Predicted RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PIPOX	Q9P0Z9	390 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	GHRL	Q9UBU3	117 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PCTP	Q9UKL6	214 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	DAPP1	Q9UN19	280 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	EXO1	Q9UQ84	846 aa	Known RBP	4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	FIS1	Q9Y3D6	152 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	PTPRB	P23467	1997 aa		4.34	□□□□□ -1.71
CBFB-208	ENST00000567947	MAP1B	P46821	2468 aa	Known RBP	4.34	□□□□□ -1.72
CBFB-208	ENST00000567947	NBEA	Q8NFP9	2946 aa		4.34	□□□□□ -1.72
CBFB-208	ENST00000567947	ITPR1	Q14643	2758 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PLXNA2	O75051	1894 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	OR6C68	A6NDL8	312 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	NEMP2	A6NFY4	417 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SEC14L6	B5MCN3	397 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	MS4A18	H0YCH9	400 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	STMND1	H3BQB6	276 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SYT5	O00445	386 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNF593	O00488	134 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	TOX3	O15405	576 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	MFSD11	O43934	449 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CIDEA	O60543	219 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	EIF4E2	O60573	245 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	TSPAN2	O60636	221 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	KHDRBS3	O75525	346 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	GATB	O75879	557 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	KDM4B	O94953	1096 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	TNFRSF6B	O95407	300 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	NSA2	O95478	260 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	RAB3D	O95716	219 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	OTC	P00480	354 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CD8A	P01732	235 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	MB	P02144	154 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	FH	P07954	510 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	HOXB5	P09067	269 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	METTL15P1	P0C7V9	234 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	COX5B	P10606	129 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CEACAM1	P13688	526 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	ADRB3	P13945	408 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	GABRG2	P18507	467 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CD1C	P29017	333 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	DDT	P30046	118 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SSTR2	P30874	369 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PCGF2	P35227	344 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	NNMT	P40261	264 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	GLP1R	P43220	463 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	KCNJ3	P48549	501 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SRP9	P49458	86 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CCR5	P51681	352 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	VSX2	P58304	361 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	YBEY	P58557	167 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SELENOW	P63302	87 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	VLDLR	P98155	873 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SSBP1	Q04837	148 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	ZNF177	Q13360	481 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SNTB2	Q13425	540 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CDH18	Q13634	790 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	DDX39B	Q13838	428 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PTGES3	Q15185	160 aa	Known RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PNLIPRP3	Q17RR3	467 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	DUOXA1	Q1HG43	343 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	AARD	Q4LEZ3	155 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	TMEM255A	Q5JRV8	349 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	LCE1E	Q5T753	118 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	ARMC12	Q5T9G4	340 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	LIPJ	Q5W064	366 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	OLFML2A	Q68BL7	652 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PLBD1	Q6P4A8	553 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	TMEM71	Q6P5X7	295 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	IL27RA	Q6UWB1	636 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	CES3	Q6UWW8	571 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	LRRN1	Q6UXK5	716 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	HIST2H3A	Q71DI3	136 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	SLC16A13	Q7RTY0	426 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	DPPA2	Q7Z7J5	298 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	NAA40	Q86UY6	237 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	FJX1	Q86VR8	437 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PARG	Q86W56	976 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	MSRB3	Q8IXL7	192 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	PGBD5	Q8N414	524 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	KCNRG	Q8N5I3	272 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	COMMD1	Q8N668	190 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	ARIH2OS	Q8N7S6	290 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	DCAF4L2	Q8NA75	395 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	OR2L5	Q8NG80	312 aa		4.33	□□□□□ -1.72
CBFB-208	ENST00000567947	OR9Q2	Q8NGE9	314 aa		4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms