RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 APLNRP35414 380 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 CDC42P60953 191 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 GALK2Q01415 458 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 SLC35D3Q5M8T2 416 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF362Q5T0B9 420 aaPredicted RBP10.58□□□□□ -0.72
SF3B3-208ENST00000567250 LCN1P1Q5VSP4 162 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 TMEM236Q5W0B7 351 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 UNQ6126/PRO20091Q6UXV3 157 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 CXXC5Q7LFL8 322 aaKnown RBP10.58□□□□□ -0.72
SF3B3-208ENST00000567250 PACRGLQ8N7B6 248 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 OR4F15Q8NGB8 312 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 OR6K6Q8NGW6 343 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 OR2AJ1Q8NGZ0 328 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 C11orf40Q8WZ69 217 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 CDADC1Q9BWV3 514 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 NMNAT2Q9BZQ4 307 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 OR2H1Q9GZK4 316 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 UBTD1Q9HAC8 227 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 NOX3Q9HBY0 568 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 TVP23BQ9NYZ1 205 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 ATPIF1Q9UII2 106 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 SPEF1Q9Y4P9 236 aa10.58□□□□□ -0.72
SF3B3-208ENST00000567250 ITPR2Q14571 2701 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 IGHV2OR16-5A0A0B4J2B6 119 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 FAM183AA6NL82 134 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 HS3ST1O14792 307 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 SGCEO43556 437 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 DOK2O60496 412 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 GLCEO94923 617 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 SNAP29O95721 258 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 GYPBP06028 91 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 CELA3BP08861 270 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 COX5BP10606 129 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 PYCR1P32322 319 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 RPS7P62081 194 aaKnown RBP10.57□□□□□ -0.72
SF3B3-208ENST00000567250 RPS23P62266 143 aaKnown RBP10.57□□□□□ -0.72
SF3B3-208ENST00000567250 ADAM8P78325 824 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 TEKQ02763 1124 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 SPOCK1Q08629 439 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 ENDOGQ14249 297 aaKnown RBP10.57□□□□□ -0.72
SF3B3-208ENST00000567250 RAB39AQ14964 217 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-208ENST00000567250 PABPC1L2AQ5JQF8 200 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 C12orf73Q69YU5 71 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 PLBD1Q6P4A8 553 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 SLC30A7Q8NEW0 376 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 GJC3Q8NFK1 279 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 FGFBP3Q8TAT2 258 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 TMEM163Q8TC26 289 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 AKAP1Q92667 903 aaKnown RBP eCLIP10.57□□□□□ -0.72
SF3B3-208ENST00000567250 FBXO17Q96EF6 278 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 LURAP1Q96LR2 239 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 DDOQ99489 341 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 CDH20Q9HBT6 801 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 IMPAD1Q9NX62 359 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 SMPD3Q9NY59 655 aaPredicted RBP10.57□□□□□ -0.72
SF3B3-208ENST00000567250 PLEK2Q9NYT0 353 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 ASH2LQ9UBL3 628 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 COMMD3-BMI1R4GMX3 469 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 PRR14LQ5THK1 2151 aa10.57□□□□□ -0.72
SF3B3-208ENST00000567250 FAM171A2A8MVW0 826 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 SHISA9B4DS77 424 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 CASQ2O14958 399 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 PATE4P0C8F1 98 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 PEX2P28328 305 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 PSG4Q00888 419 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 RAB35Q15286 201 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 KLHL12Q53G59 568 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 NXNL2Q5VZ03 156 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF544Q6NX49 715 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ARL9Q6T311 187 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 UGT2A3Q6UWM9 527 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 PAMR1Q6UXH9 720 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 MYPOPQ86VE0 399 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF584Q8IVC4 421 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 CPOQ8IVL8 374 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 GID4Q8IVV7 300 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF611Q8N823 705 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 TCEANCQ8N8B7 351 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 NUP37Q8NFH4 326 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 OR8J1Q8NGP2 316 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 IPCEF1Q8WWN9 437 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 HRASLS5Q96KN8 279 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF75AQ96N20 296 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 HDHD2Q9H0R4 259 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 OR51V1Q9H2C8 321 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 PLEKHF2Q9H8W4 249 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 HINT3Q9NQE9 182 aaKnown RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 CISD1Q9NZ45 108 aaKnown RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 H2AFY2Q9P0M6 372 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ATP23Q9Y6H3 246 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 ABCA4P78363 2273 aa10.56□□□□□ -0.72
SF3B3-208ENST00000567250 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 SLC22A31A6NKX4 558 aa10.55□□□□□ -0.72
SF3B3-208ENST00000567250 VSTM5A8MXK1 200 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms