RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NMD3Q96D46 503 aaKnown RBP11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 Q96M85 177 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 GPX7Q96SL4 187 aaPredicted RBP11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 ALG12Q9BV10 488 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 YY1AP1Q9H869 796 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 SIAEQ9HAT2 523 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 REV1Q9UBZ9 1251 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 U3KQV3 271 aa11.72□□□□□ -0.53
VPS9D1-204ENST00000565023 MALRD1Q5VYJ5 2156 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 IGHV4-61A0A0C4DH41 118 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 LOC390937A0A1W2PQ73 354 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 A6NIZ1 184 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 A8MV72 311 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 SYNGR3O43761 229 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 TLX2O43763 284 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 CRLF1O75462 422 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 CCNB2O95067 398 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 PTHP01270 115 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 IGFBP1P08833 259 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 MMP7P09237 267 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 IGHV4-31P0DP07 118 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 NAT2P11245 290 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 APEHP13798 732 aaKnown RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 GUCA1AP43080 201 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 ERFP50548 548 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF133P52736 654 aaPredicted RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 RAP1BP61224 184 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 RAP1AP62834 184 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 MRPS34P82930 218 aaKnown RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 TSPAN31Q12999 210 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 NKPD1Q17RQ9 610 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 MICAQ29983 383 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 THEM4Q5T1C6 240 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 C6orf52Q5T4I8 152 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 FAM205BPQ63HN1 556 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 THSD4Q6ZMP0 1018 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 FAM122BQ7Z309 247 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 DPPA2Q7Z7J5 298 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 ARIH2OSQ8N7S6 290 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 OR9Q2Q8NGE9 314 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 OR1J2Q8NGS2 313 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 GNPDA2Q8TDQ7 276 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 UBASH3BQ8TF42 649 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 NABP1Q96AH0 204 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 RASD2Q96D21 266 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 DUS3LQ96G46 650 aaKnown RBP11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 ZNF570Q96NI8 536 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 NDEL1Q9GZM8 345 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 CHODLQ9H9P2 273 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 EMC7Q9NPA0 242 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 TAAR3PQ9P1P4 343 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 GRHPRQ9UBQ7 328 aa11.71□□□□□ -0.53
VPS9D1-204ENST00000565023 TEX13CA0A0J9YWL9 993 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 LRP5LA4QPB2 252 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 VWC2LB2RUY7 222 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 NDUFS8O00217 210 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 XKRYO14609 159 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 IMPA2O14732 288 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 MGRN1O60291 552 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 GASTP01350 101 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 CCNIQ14094 377 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 RFX4Q33E94 735 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 MESTQ5EB52 335 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 SPATA46Q5T0L3 261 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 SMARCD3Q6STE5 483 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 DPY19L2P2Q6ZN68 376 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 CPEB3Q8NE35 698 aaKnown RBP11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 OR1J1Q8NGS3 322 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 C1orf198Q9H425 327 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 SMURF2Q9HAU4 748 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 MYOZ1Q9NP98 299 aaPredicted RBP11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 NRIP3Q9NQ35 241 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 DNAJB9Q9UBS3 223 aa11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 FBXO9Q9UK97 447 aaPredicted RBP11.7□□□□□ -0.54
VPS9D1-204ENST00000565023 FBN1P35555 2871 aaKnown RBP11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ATRQ13535 2644 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 SLC22A23A1A5C7 686 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 C5orf49A4QMS7 147 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ARRDC5A6NEK1 342 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 SOCS2O14508 198 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 GNGT2O14610 69 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 CIB2O75838 187 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 HPXP02790 462 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 STOMP27105 288 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 CENPAP49450 140 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 GDI2P50395 445 aaKnown RBP11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 PSG4Q00888 419 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 KRR1Q13601 381 aaKnown RBP11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 NRN1LQ496H8 165 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 GPR139Q6DWJ6 353 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF774Q6NX45 483 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 UGT2A3Q6UWM9 527 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ZNF620Q6ZNG0 422 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 TMEM179BQ7Z7N9 219 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 AQP11Q8NBQ7 271 aa11.69□□□□□ -0.54
VPS9D1-204ENST00000565023 OR10G2Q8NGC3 310 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms