RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 HPXP02790 462 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 CD74P04233 296 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 IGKV3-11P04433 115 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 AMY2AP04746 511 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 IGHV4-34P06331 123 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 FCER2P06734 321 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 OR4E1P0C645 316 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 GIMD1P0DJR0 217 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 MYOGP15173 224 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ZNF20P17024 532 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 RAB3AP20336 220 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 MAOAP21397 527 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 BDKRB2P30411 391 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 GNALP38405 381 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 CX3CR1P49238 355 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 FNTBP49356 437 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ARRB1P49407 418 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 MAZP56270 477 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ACY1Q03154 408 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 HLXQ14774 488 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 UBXN2BQ14CS0 331 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 EBPQ15125 230 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 POU4F3Q15319 338 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 NSDHLQ15738 373 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ACKR1Q16570 336 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PNLIPRP3Q17RR3 467 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 DEFB110Q30KQ9 67 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 C14orf28Q4W4Y0 310 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 VWA2Q5GFL6 755 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 WDR38Q5JTN6 314 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 THEM4Q5T1C6 240 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 MRPL14Q6P1L8 145 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 FAM122CQ6P4D5 195 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 OGFOD3Q6PK18 319 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SLC36A1Q7Z2H8 476 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PEG10Q86TG7 708 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ZNF546Q86UE3 836 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 DTX3Q8N9I9 347 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PNLDC1Q8NA58 520 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 CLEC1AQ8NC01 280 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 OR11H4Q8NGC9 324 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 OR5M9Q8NGP3 310 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 OR8K3Q8NH51 312 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 NUBPLQ8TB37 319 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ZNF519Q8TB69 540 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 LMX1AQ8TE12 382 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PTPMT1Q8WUK0 201 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SLC25A43Q8WUT9 341 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 TAAR8Q969N4 342 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SLC25A36Q96CQ1 311 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 GAL3ST4Q96RP7 486 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SEC22CQ9BRL7 303 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 GPR174Q9BXC1 333 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 TTTY10Q9BZA0 68 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 WWTR1Q9GZV5 400 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 NXF5Q9H1B4 397 aaKnown RBP6.88□□□□□ -1.31
ATXN3-249ENST00000564606 PIGMQ9H3S5 423 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SYNPO2LQ9H987 977 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 FAM60AQ9NP50 221 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 FANCFQ9NPI8 374 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 STARD5Q9NSY2 213 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 SDHAF2Q9NX18 166 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 OR52A1Q9UKL2 312 aa6.88□□□□□ -1.31
ATXN3-249ENST00000564606 IGKV3D-11A0A0A0MRZ8 115 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 A0A0B4J203 849 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 A0A0B4J2A0 478 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 TMEM269A0A1B0GVZ9 245 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 LOC390937A0A1W2PQ73 354 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 RPS10-NUDT3A0A1W2PQS6 291 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 SLC22A23A1A5C7 686 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 RAB19A4D1S5 217 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 TVP23AA6NH52 213 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 C10orf142B7Z368 130 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 SOX1O00570 391 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 PLPP3O14495 311 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 DVL2O14641 736 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 CDC123O75794 336 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 TSPAN9O75954 239 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 TOXO94900 526 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 AKR7A3O95154 331 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 GSTP1P09211 210 aaKnown RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 ACSM4P0C7M7 580 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 IGFBP3P17936 291 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 ANXA7P20073 488 aaKnown RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 GRPRP30550 384 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 SSTR2P30874 369 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 EIF1P41567 113 aaKnown RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 SELENOPP49908 381 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 ZNF41P51814 821 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 PRKXP51817 358 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 NR0B1P51843 470 aaKnown RBP6.87□□□□□ -1.31
ATXN3-249ENST00000564606 ZP1P60852 638 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 PLAURQ03405 335 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 ZNF117Q03924 483 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 TAF13Q15543 124 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 CD226Q15762 336 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 PCK2Q16822 640 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 FAM209AQ5JX71 171 aa6.87□□□□□ -1.31
ATXN3-249ENST00000564606 PRAMEF17Q5VTA0 474 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms